Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 12:116261196-116411050

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21 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dync2i1 12 116206262 to 116263022 56760 - protein coding gene dynein 2 intermediate chain 1
Cpgi5215 12 116262661 to 116263197 536 CpG island CpG island 5215
Tssr118134 12 116262946 to 116263046 100 - TSS region transcription start site region 118134
Gm11027 12 116275386 to 116275612 226 + protein coding gene predicted gene 11027
Gm48079 12 116279682 to 116280231 549 - lncRNA gene predicted gene, 48079
Gm4132 12 116280398 to 116280988 590 - unclassified gene predicted gene 4132
Cpgi5216 12 116280542 to 116282212 1670 CpG island CpG island 5216
Tssr115517 12 116281180 to 116281229 49 + TSS region transcription start site region 115517
Esyt2 12 116281196 to 116391050 109854 + protein coding gene extended synaptotagmin-like protein 2
Tssr115518 12 116281244 to 116281261 17 + TSS region transcription start site region 115518
Tssr115519 12 116281268 to 116281280 12 + TSS region transcription start site region 115519
Tssr115520 12 116281291 to 116281294 3 + TSS region transcription start site region 115520
Tssr115521 12 116373957 to 116373965 8 + TSS region transcription start site region 115521
D430020J02Rik 12 116401947 to 116405161 3214 - lncRNA gene RIKEN cDNA D430020J02 gene
Cpgi5217 12 116405003 to 116405986 983 CpG island CpG island 5217
Tssr118135 12 116405103 to 116405154 51 - TSS region transcription start site region 118135
Tssr118136 12 116405157 to 116405185 28 - TSS region transcription start site region 118136
Tssr118137 12 116405189 to 116405217 28 - TSS region transcription start site region 118137
Tssr115522 12 116405341 to 116405363 22 + TSS region transcription start site region 115522
Ncapg2 12 116405351 to 116463532 58181 + protein coding gene non-SMC condensin II complex, subunit G2
Tssr115523 12 116405397 to 116405466 69 + TSS region transcription start site region 115523