Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:113345252-113425312

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scrd2 12 109969663 to 113361762 3392099 heritable phenotypic marker smallest common region of deletion 2
Ighg3 12 113357442 to 113361232 3790 - gene segment Immunoglobulin heavy constant gamma 3
Tssr115498 12 113359910 to 113359956 46 + TSS region transcription start site region 115498
Tssr117958 12 113360371 to 113360398 27 - TSS region transcription start site region 117958
Tssr3970 12 113360554 to 113360574 20 - TSS region transcription start site region 3970
D12Mit20 12 113361566 to 113361762 196 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 20
Igh-8 12 113365795 to 113367226 1431 gene segment immunoglobulin heavy chain 8 (heavy chain of IgG3)
Tssr117959 12 113366503 to 113366538 35 - TSS region transcription start site region 117959
Gm17421 12 113369522 to 113372201 2679 + pseudogene predicted gene, 17421
Gm9134 12 113381011 to 113381561 550 - pseudogene predicted gene 9134
Cpgi5210 12 113381449 to 113381734 285 CpG island CpG island 5210
Gm9136 12 113396783 to 113397225 442 - pseudogene predicted gene 9136
Gm5190 12 113397229 to 113397585 356 + pseudogene predicted gene 5190
Tssr117960 12 113407307 to 113407318 11 - TSS region transcription start site region 117960
Ighd 12 113407535 to 113416324 8789 - gene segment immunoglobulin heavy constant delta
Tssr117961 12 113414396 to 113414408 12 - TSS region transcription start site region 117961
Tssr117962 12 113414583 to 113414594 11 - TSS region transcription start site region 117962
Tssr117963 12 113415553 to 113415566 13 - TSS region transcription start site region 117963
Tssr117964 12 113416305 to 113416314 9 - TSS region transcription start site region 117964
Ighm 12 113418826 to 113422730 3904 - gene segment immunoglobulin heavy constant mu
D12Mit8 12 113419742 to 113419913 171 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 8
W6q10 12 113419913 to 80909934 -32509979 QTL weight 6 weeks QTL 10
Tailaq1 12 113419913 to 80909934 -32509979 QTL tail length adjusted QTL 1
Egq10 12 113419913 to 80909934 -32509979 QTL early growth QTL 10
Lvrq10 12 113419913 to 80909934 -32509979 QTL liver weight QTL 10
Tssr117965 12 113419994 to 113420006 12 - TSS region transcription start site region 117965
Tssr117966 12 113421115 to 113421132 17 - TSS region transcription start site region 117966
Tssr117967 12 113421159 to 113421174 15 - TSS region transcription start site region 117967
Tssr117968 12 113421188 to 113421199 11 - TSS region transcription start site region 117968
Tssr117969 12 113421422 to 113421441 19 - TSS region transcription start site region 117969
Tssr117970 12 113421469 to 113421492 23 - TSS region transcription start site region 117970
Tssr115499 12 113421605 to 113421617 12 + TSS region transcription start site region 115499
Tssr117971 12 113421632 to 113421692 60 - TSS region transcription start site region 117971
Tssr115500 12 113421641 to 113421661 20 + TSS region transcription start site region 115500
Tssr117972 12 113421998 to 113422012 14 - TSS region transcription start site region 117972
Tssr117973 12 113422034 to 113422043 9 - TSS region transcription start site region 117973
Tssr115501 12 113422040 to 113422075 35 + TSS region transcription start site region 115501
Tssr117974 12 113422067 to 113422118 51 - TSS region transcription start site region 117974
Tssr115502 12 113422082 to 113422101 19 + TSS region transcription start site region 115502
Tssr117975 12 113422142 to 113422171 29 - TSS region transcription start site region 117975
Tssr117976 12 113422201 to 113422229 28 - TSS region transcription start site region 117976
Tssr117977 12 113422235 to 113422271 36 - TSS region transcription start site region 117977
Tssr117978 12 113422386 to 113422414 28 - TSS region transcription start site region 117978
Tssr117979 12 113422511 to 113422518 7 - TSS region transcription start site region 117979
Tssr115503 12 113422529 to 113422542 13 + TSS region transcription start site region 115503
Tssr117980 12 113422532 to 113422548 16 - TSS region transcription start site region 117980
Tssr117981 12 113422631 to 113422641 10 - TSS region transcription start site region 117981
Tssr117982 12 113422652 to 113422661 9 - TSS region transcription start site region 117982
Tssr117983 12 113422692 to 113422714 22 - TSS region transcription start site region 117983
Tssr117984 12 113422735 to 113422744 9 - TSS region transcription start site region 117984
Gm25747 12 113424645 to 113424722 77 - miRNA gene predicted gene, 25747
Gm24022 12 113424724 to 113424783 59 - miRNA gene predicted gene, 24022
Gm22175 12 113425150 to 113425227 77 - miRNA gene predicted gene, 22175