Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:108816122-108886129

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Yy1 12 108793269 to 108816632 23363 + protein coding gene YY1 transcription factor
Slc25a29 12 108825878 to 108835876 9998 - protein coding gene solute carrier family 25 (mitochondrial carrier, palmitoylcarnitine transporter), member 29
Cpgi5091 12 108826755 to 108827232 477 CpG island CpG island 5091
Gm33813 12 108829533 to 108838664 9131 + lncRNA gene predicted gene, 33813
Tssr115022 12 108829706 to 108829713 7 + TSS region transcription start site region 115022
Cpgi5092 12 108835229 to 108836543 1314 CpG island CpG island 5092
Tssr117706 12 108835786 to 108835792 6 - TSS region transcription start site region 117706
Tssr117707 12 108835809 to 108835832 23 - TSS region transcription start site region 117707
Tssr117708 12 108835845 to 108835893 48 - TSS region transcription start site region 117708
Tssr115023 12 108836027 to 108836088 61 + TSS region transcription start site region 115023
Tssr115024 12 108836385 to 108836396 11 + TSS region transcription start site region 115024
Mir345 12 108836973 to 108837068 95 + miRNA gene microRNA 345
Tssr115025 12 108837045 to 108837049 4 + TSS region transcription start site region 115025
Tssr115026 12 108838545 to 108838605 60 + TSS region transcription start site region 115026
Slc25a47 12 108849813 to 108856815 7002 + protein coding gene solute carrier family 25, member 47
Tssr115027 12 108851122 to 108851129 7 + TSS region transcription start site region 115027
Tssr115028 12 108853477 to 108853508 31 + TSS region transcription start site region 115028
Tssr115029 12 108855332 to 108855362 30 + TSS region transcription start site region 115029
Wars 12 108860030 to 108894174 34144 - protein coding gene tryptophanyl-tRNA synthetase
Gm22079 12 108862564 to 108862669 105 - snRNA gene predicted gene, 22079
Tssr115030 12 108865449 to 108865460 11 + TSS region transcription start site region 115030
Tssr117709 12 108871610 to 108871617 7 - TSS region transcription start site region 117709
Tssr117710 12 108873273 to 108873284 11 - TSS region transcription start site region 117710
Tssr117711 12 108875520 to 108875529 9 - TSS region transcription start site region 117711
Tssr3942 12 108875534 to 108875539 5 - TSS region transcription start site region 3942
Tssr117712 12 108875541 to 108875550 9 - TSS region transcription start site region 117712
Tssr117713 12 108875570 to 108875580 10 - TSS region transcription start site region 117713
Tssr117714 12 108875587 to 108875616 29 - TSS region transcription start site region 117714
Tssr117715 12 108875625 to 108875630 5 - TSS region transcription start site region 117715
Tssr117716 12 108875643 to 108875654 11 - TSS region transcription start site region 117716
5033424D13Rik 12 108878769 to 108879416 647 + unclassified gene RIKEN cDNA 5033424D13 gene
Tssr117717 12 108882741 to 108882768 27 - TSS region transcription start site region 117717
Tssr117718 12 108882772 to 108882779 7 - TSS region transcription start site region 117718
Tssr117719 12 108882784 to 108882800 16 - TSS region transcription start site region 117719
Tssr117720 12 108884336 to 108884346 10 - TSS region transcription start site region 117720
Tssr117721 12 108884398 to 108884411 13 - TSS region transcription start site region 117721
Tssr117722 12 108885799 to 108885808 9 - TSS region transcription start site region 117722
Tssr117723 12 108885883 to 108885891 8 - TSS region transcription start site region 117723