Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:108706515-108808191

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm40572 12 108703524 to 108711559 8035 - lncRNA gene predicted gene, 40572
Tssr117694 12 108710972 to 108710995 23 - TSS region transcription start site region 117694
Tssr115010 12 108713773 to 108713780 7 + TSS region transcription start site region 115010
Gm23872 12 108721848 to 108721924 76 - miRNA gene predicted gene, 23872
Gm48048 12 108737141 to 108737626 485 - pseudogene predicted gene, 48048
Gm33628 12 108756515 to 108758191 1676 - lncRNA gene predicted gene, 33628
Cpgi5089 12 108757649 to 108758278 629 CpG island CpG island 5089
Tssr3941 12 108760827 to 108760863 36 + TSS region transcription start site region 3941
Tssr117695 12 108761330 to 108761342 12 - TSS region transcription start site region 117695
Tssr117696 12 108761384 to 108761400 16 - TSS region transcription start site region 117696
Tssr115011 12 108761523 to 108761536 13 + TSS region transcription start site region 115011
Gm33682 12 108762032 to 108762970 938 - lincRNA gene predicted gene, 33682
Tssr117697 12 108765785 to 108765795 10 - TSS region transcription start site region 117697
Tssr117698 12 108765807 to 108765828 21 - TSS region transcription start site region 117698
Tssr117699 12 108765847 to 108765858 11 - TSS region transcription start site region 117699
Tssr117700 12 108765864 to 108765904 40 - TSS region transcription start site region 117700
Tssr115012 12 108765965 to 108765971 6 + TSS region transcription start site region 115012
Tssr117701 12 108765990 to 108765995 5 - TSS region transcription start site region 117701
Gm40573 12 108777988 to 108780655 2667 - lncRNA gene predicted gene, 40573
Gm34220 12 108790035 to 108792743 2708 - protein coding gene predicted gene, 34220
Cpgi5090 12 108792098 to 108794989 2891 CpG island CpG island 5090
Tssr115013 12 108792336 to 108792355 19 + TSS region transcription start site region 115013
Tssr117702 12 108792641 to 108792654 13 - TSS region transcription start site region 117702
Tssr117703 12 108792670 to 108792683 13 - TSS region transcription start site region 117703
Tssr117704 12 108792687 to 108792748 61 - TSS region transcription start site region 117704
Tssr115014 12 108792946 to 108792988 42 + TSS region transcription start site region 115014
Tssr115015 12 108792997 to 108793014 17 + TSS region transcription start site region 115015
Tssr115016 12 108793017 to 108793044 27 + TSS region transcription start site region 115016
Tssr115017 12 108793100 to 108793132 32 + TSS region transcription start site region 115017
Tssr115018 12 108793268 to 108793275 7 + TSS region transcription start site region 115018
Yy1 12 108793269 to 108816632 23363 + protein coding gene YY1 transcription factor
Tssr115019 12 108793285 to 108793375 90 + TSS region transcription start site region 115019
Tssr115020 12 108793418 to 108793431 13 + TSS region transcription start site region 115020
Tssr115021 12 108793931 to 108793945 14 + TSS region transcription start site region 115021
Tssr117705 12 108794174 to 108794218 44 - TSS region transcription start site region 117705
D12Mit181 12 108798859 to 108798968 109 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 181