Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 12:102001512-102311621

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpsf2 12 101975764 to 102005993 30229 + protein coding gene cleavage and polyadenylation specific factor 2
Tssr114733 12 102005534 to 102005582 48 + TSS region transcription start site region 114733
Gm16339 12 102127806 to 102129906 2100 - antisense lncRNA gene predicted gene 16339
Cpgi5002 12 102128169 to 102128358 189 CpG island CpG island 5002
Cpgi5003 12 102128596 to 102129810 1214 CpG island CpG island 5003
Tssr114734 12 102128718 to 102128739 21 + TSS region transcription start site region 114734
Slc24a4 12 102128733 to 102267091 138358 + protein coding gene solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
Tssr114735 12 102129019 to 102129049 30 + TSS region transcription start site region 114735
D12Mit277 12 102156512 to 102156621 109 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 277
Gm25203 12 102253473 to 102253687 214 - snoRNA gene predicted gene, 25203
Tssr117394 12 102253685 to 102253687 2 - TSS region transcription start site region 117394
C030009J22Rik 12 102270390 to 102272490 2100 unclassified gene RIKEN cDNA C030009J22 gene
Tssr114736 12 102270415 to 102270417 2 + TSS region transcription start site region 114736
Cpgi5004 12 102282668 to 102283793 1125 CpG island CpG island 5004
Tssr114737 12 102282861 to 102282871 10 + TSS region transcription start site region 114737
Tssr114738 12 102283036 to 102283079 43 + TSS region transcription start site region 114738
Rin3 12 102283048 to 102390855 107807 + protein coding gene Ras and Rab interactor 3
Tssr3924 12 102283078 to 102283098 20 - TSS region transcription start site region 3924
Tssr114739 12 102283087 to 102283096 9 + TSS region transcription start site region 114739
Tssr114740 12 102283116 to 102283194 78 + TSS region transcription start site region 114740
Tssr114741 12 102283203 to 102283234 31 + TSS region transcription start site region 114741
Tssr114742 12 102283256 to 102283274 18 + TSS region transcription start site region 114742
D12Mit180 12 102298104 to 102298236 132 DNA segment DNA segment, Chr 12, Massachusetts Institute of Technology 180
Tssr117395 12 102302405 to 102302415 10 - TSS region transcription start site region 117395