Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:87752265-87762269

17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr103966	11	87754860 to 87754871	11	+	TSS region	transcription start site region 103966
Tssr103967	11	87755567 to 87755588	21	+	TSS region	transcription start site region 103967
Mir142hg	11	87755577 to 87757270	1693	+	lincRNA gene	Mir142 host gene (non-protein coding)
Tssr103968	11	87755889 to 87755901	12	+	TSS region	transcription start site region 103968
Tssr103969	11	87756631 to 87756635	4	+	TSS region	transcription start site region 103969
Tssr103970	11	87756789 to 87756826	37	+	TSS region	transcription start site region 103970
Cpgi3497	11	87756804 to 87757353	549		CpG island	CpG island 3497
Mir142b	11	87756841 to 87756955	114	-	miRNA gene	microRNA 142b
Mir142	11	87756864 to 87756927	63	+	miRNA gene	microRNA 142
Tssr103971	11	87756925 to 87756929	4	+	TSS region	transcription start site region 103971
Tssr109975	11	87757265 to 87757269	4	-	TSS region	transcription start site region 109975
Tssr103972	11	87760533 to 87760551	18	+	TSS region	transcription start site region 103972
Tspoap1	11	87760541 to 87785928	25387	+	protein coding gene	TSPO associated protein 1
Cpgi3498	11	87760702 to 87760864	162		CpG island	CpG island 3498
Tssr103973	11	87760898 to 87760903	5	+	TSS region	transcription start site region 103973
Tssr103974	11	87761062 to 87761067	5	+	TSS region	transcription start site region 103974
Tssr103975	11	87762048 to 87762069	21	+	TSS region	transcription start site region 103975