Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:79607962-79698404

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rab11fip4 11 79591212 to 79698023 106811 + protein coding gene RAB11 family interacting protein 4 (class II)
Rab11fip4os1 11 79607079 to 79623163 16084 - antisense lncRNA gene RAB11 family interacting protein 4 (class II), opposite strand 1
Tssr109522 11 79623120 to 79623125 5 - TSS region transcription start site region 109522
Gm25867 11 79635311 to 79635413 102 - snRNA gene predicted gene, 25867
Gm30718 11 79638637 to 79646834 8197 - lncRNA gene predicted gene, 30718
Gm24887 11 79639021 to 79639128 107 - snRNA gene predicted gene, 24887
Cpgi3368 11 79652962 to 79653404 442 CpG island CpG island 3368
Tssr103456 11 79653132 to 79653145 13 + TSS region transcription start site region 103456
Tssr103457 11 79653181 to 79653186 5 + TSS region transcription start site region 103457
Cpgi3369 11 79660320 to 79661370 1050 CpG island CpG island 3369
Tssr103458 11 79660532 to 79660561 29 + TSS region transcription start site region 103458
Tssr103459 11 79660572 to 79660618 46 + TSS region transcription start site region 103459
Tssr103460 11 79660637 to 79660648 11 + TSS region transcription start site region 103460
Tssr103461 11 79660674 to 79660690 16 + TSS region transcription start site region 103461
Tssr103462 11 79660704 to 79660727 23 + TSS region transcription start site region 103462
Tssr103463 11 79660741 to 79660752 11 + TSS region transcription start site region 103463
Rab11fip4os2 11 79670373 to 79675086 4713 - antisense lncRNA gene RAB11 family interacting protein 4 (class II), opposite strand 2
D11Bhm108 11 79671579 to 79671658 79 DNA segment DNA segment, Chr 11, Boehm 108
Tssr103464 11 79673931 to 79673944 13 + TSS region transcription start site region 103464
Tssr109523 11 79675125 to 79675130 5 - TSS region transcription start site region 109523
Tssr103465 11 79694906 to 79694910 4 + TSS region transcription start site region 103465