Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:79527079-79703163

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nf1 11 79339693 to 79581612 241919 + protein coding gene neurofibromin 1
Evi2 11 79513385 to 79530589 17204 - protein coding gene ecotropic viral integration site 2
Evi2a 11 79526560 to 79530609 4049 - protein coding gene ecotropic viral integration site 2a
Tssr109511 11 79527674 to 79527691 17 - TSS region transcription start site region 109511
Tssr103449 11 79528132 to 79528137 5 + TSS region transcription start site region 103449
Tssr103450 11 79528178 to 79528192 14 + TSS region transcription start site region 103450
Tssr103451 11 79528203 to 79528215 12 + TSS region transcription start site region 103451
Tssr109512 11 79530392 to 79530402 10 - TSS region transcription start site region 109512
Tssr109513 11 79530407 to 79530418 11 - TSS region transcription start site region 109513
Tssr109514 11 79530423 to 79530435 12 - TSS region transcription start site region 109514
Tssr109515 11 79530441 to 79530468 27 - TSS region transcription start site region 109515
Tssr109516 11 79530475 to 79530488 13 - TSS region transcription start site region 109516
Tssr109517 11 79530502 to 79530513 11 - TSS region transcription start site region 109517
Tssr109518 11 79530517 to 79530532 15 - TSS region transcription start site region 109518
Tssr109519 11 79530549 to 79530565 16 - TSS region transcription start site region 109519
Tssr109520 11 79530569 to 79530595 26 - TSS region transcription start site region 109520
Tssr109521 11 79530605 to 79530614 9 - TSS region transcription start site region 109521
9530078B04Rik 11 79538124 to 79539250 1126 unclassified gene RIKEN cDNA 9530078B04 gene
Tssr103452 11 79540645 to 79540654 9 + TSS region transcription start site region 103452
Tssr103453 11 79578854 to 79578858 4 + TSS region transcription start site region 103453
Tssr103454 11 79579144 to 79579154 10 + TSS region transcription start site region 103454
Cpgi3367 11 79590480 to 79592010 1530 CpG island CpG island 3367
Tssr103455 11 79591120 to 79591224 104 + TSS region transcription start site region 103455
Rab11fip4 11 79591212 to 79698023 106811 + protein coding gene RAB11 family interacting protein 4 (class II)
Gm23293 11 79595165 to 79595268 103 + snRNA gene predicted gene, 23293
Rab11fip4os1 11 79607079 to 79623163 16084 - antisense lncRNA gene RAB11 family interacting protein 4 (class II), opposite strand 1
Tssr109522 11 79623120 to 79623125 5 - TSS region transcription start site region 109522
Gm25867 11 79635311 to 79635413 102 - snRNA gene predicted gene, 25867
Gm30718 11 79638637 to 79646834 8197 - lncRNA gene predicted gene, 30718
Gm24887 11 79639021 to 79639128 107 - snRNA gene predicted gene, 24887
Cpgi3368 11 79652962 to 79653404 442 CpG island CpG island 3368
Tssr103456 11 79653132 to 79653145 13 + TSS region transcription start site region 103456
Tssr103457 11 79653181 to 79653186 5 + TSS region transcription start site region 103457
Cpgi3369 11 79660320 to 79661370 1050 CpG island CpG island 3369
Tssr103458 11 79660532 to 79660561 29 + TSS region transcription start site region 103458
Tssr103459 11 79660572 to 79660618 46 + TSS region transcription start site region 103459
Tssr103460 11 79660637 to 79660648 11 + TSS region transcription start site region 103460
Tssr103461 11 79660674 to 79660690 16 + TSS region transcription start site region 103461
Tssr103462 11 79660704 to 79660727 23 + TSS region transcription start site region 103462
Tssr103463 11 79660741 to 79660752 11 + TSS region transcription start site region 103463
Rab11fip4os2 11 79670373 to 79675086 4713 - antisense lncRNA gene RAB11 family interacting protein 4 (class II), opposite strand 2
D11Bhm108 11 79671579 to 79671658 79 DNA segment DNA segment, Chr 11, Boehm 108
Tssr103464 11 79673931 to 79673944 13 + TSS region transcription start site region 103464
Tssr109523 11 79675125 to 79675130 5 - TSS region transcription start site region 109523
Tssr103465 11 79694906 to 79694910 4 + TSS region transcription start site region 103465