Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:78661984-78772036

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nlk 11 78567168 to 78697373 130205 - protein coding gene nemo like kinase
D11Seg43 11 78662097 to 78662261 164 DNA segment DNA segment, Chr 11, Segre 43
D11Bhm68 11 78662133 to 78662251 118 DNA segment DNA segment, Chr 11, Boehm 68
Tssr103331 11 78676619 to 78676624 5 + TSS region transcription start site region 103331
D11Ertd80e 11 78685077 to 78685306 229 DNA segment DNA segment, Chr 11, ERATO Doi 80, expressed
Tssr109414 11 78690009 to 78690013 4 - TSS region transcription start site region 109414
Tssr109415 11 78694217 to 78694221 4 - TSS region transcription start site region 109415
D11Bhm69 11 78695584 to 78695792 208 DNA segment DNA segment, Chr 11, Boehm 69
Cpgi3356 11 78695947 to 78696119 172 CpG island CpG island 3356
Tssr109416 11 78696204 to 78696224 20 - TSS region transcription start site region 109416
Tssr109417 11 78696496 to 78696541 45 - TSS region transcription start site region 109417
Cpgi3357 11 78696926 to 78697643 717 CpG island CpG island 3357
Tssr109418 11 78697283 to 78697290 7 - TSS region transcription start site region 109418
Tssr109419 11 78697370 to 78697475 105 - TSS region transcription start site region 109419
Tssr109420 11 78697585 to 78697605 20 - TSS region transcription start site region 109420
Cpgi3358 11 78700159 to 78700468 309 CpG island CpG island 3358
Gm11197 11 78708738 to 78709761 1023 - pseudogene predicted gene 11197
D11Bhm70 11 78709064 to 78709187 123 DNA segment DNA segment, Chr 11, Boehm 70
D11Bhm71 11 78716984 to 78717036 52 DNA segment DNA segment, Chr 11, Boehm 71
D11Bhm158 11 78724510 to 78724609 99 DNA segment DNA segment, Chr 11, Boehm 158
Ccnq 11 78750506 to 78751729 1223 - protein coding gene cyclin Q
Cpgi3359 11 78751327 to 78752084 757 CpG island CpG island 3359
Tssr109421 11 78751656 to 78751711 55 - TSS region transcription start site region 109421
Gm23840 11 78754426 to 78754522 96 - miRNA gene predicted gene, 23840
D11Bhm159 11 78758149 to 78758291 142 DNA segment DNA segment, Chr 11, Boehm 159
D11Mit117 11 78770210 to 78770319 109 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 117
D11Bhm72 11 78771280 to 78771385 105 DNA segment DNA segment, Chr 11, Boehm 72