Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:78538169-78678173

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ift20 11 78536436 to 78541473 5037 + protein coding gene intraflagellar transport 20
Tssr109407 11 78541470 to 78541474 4 - TSS region transcription start site region 109407
Tmem97 11 78541817 to 78550735 8918 - protein coding gene transmembrane protein 97
D11Bhm61 11 78543180 to 78543377 197 DNA segment DNA segment, Chr 11, Boehm 61
D11Seg37 11 78543508 to 78543608 100 DNA segment DNA segment, Chr 11, Segre 37
Cpgi3355 11 78550319 to 78551125 806 CpG island CpG island 3355
Tssr109408 11 78550674 to 78550749 75 - TSS region transcription start site region 109408
Tssr109409 11 78550758 to 78550771 13 - TSS region transcription start site region 109409
Tssr109410 11 78550801 to 78550812 11 - TSS region transcription start site region 109410
Tssr103330 11 78550921 to 78550960 39 + TSS region transcription start site region 103330
D11Bhm157 11 78561174 to 78561305 131 DNA segment DNA segment, Chr 11, Boehm 157
D11Mit353 11 78561209 to 78561299 90 DNA segment DNA Segment, Chr 11 Massachusetts Institute of Technology 353
D11Bhm181e 11 78561319 to 78561600 281 - pseudogene DNA segment, Chr 11, Boehm 181, expressed
Gm22947 11 78561645 to 78561735 90 - snoRNA gene predicted gene, 22947
Nlk 11 78567168 to 78697373 130205 - protein coding gene nemo like kinase
D2Abb1e 11 78567228 to 78567440 212 DNA segment DNA segment, Chr 2, Abbott 1 expressed
D11Bhm62 11 78569243 to 78569458 215 DNA segment DNA segment, Chr 11, Boehm 62
Gm17235 11 78576237 to 78577352 1115 + pseudogene predicted gene 17235
D11Seg41 11 78581087 to 78581208 121 DNA segment DNA segment, Chr 11, Segre 41
Gm11196 11 78585161 to 78585555 394 - pseudogene predicted gene 11196
D11Bhm63 11 78603691 to 78603775 84 DNA segment DNA segment, Chr 11, Boehm 63
Tssr109411 11 78608169 to 78608173 4 - TSS region transcription start site region 109411
5830445D09Rik 11 78615534 to 78616561 1027 unclassified gene RIKEN cDNA 5830445D09 gene
D11Bhm64 11 78616366 to 78616442 76 DNA segment DNA segment, Chr 11, Boehm 64
D11Bhm65 11 78628139 to 78628300 161 DNA segment DNA segment, Chr 11, Boehm 65
D11Seg42 11 78632677 to 78633441 764 DNA segment DNA segment, Chr 11, Segre 42
D11Bhm66 11 78648656 to 78648714 58 DNA segment DNA segment, Chr 11, Boehm 66
Tssr3589 11 78649149 to 78649151 2 - TSS region transcription start site region 3589
D11Bhm67 11 78649380 to 78649478 98 DNA segment DNA segment, Chr 11, Boehm 67
Tssr109412 11 78652682 to 78652685 3 - TSS region transcription start site region 109412
Tssr109413 11 78657065 to 78657069 4 - TSS region transcription start site region 109413
D11Seg43 11 78662097 to 78662261 164 DNA segment DNA segment, Chr 11, Segre 43
D11Bhm68 11 78662133 to 78662251 118 DNA segment DNA segment, Chr 11, Boehm 68
Tssr103331 11 78676619 to 78676624 5 + TSS region transcription start site region 103331