Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:78183392-78215763

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rpl23a 11 78180935 to 78183584 2649 - protein coding gene ribosomal protein L23A
Cpgi3335 11 78183139 to 78183568 429 CpG island CpG island 3335
Tssr109379 11 78183551 to 78183574 23 - TSS region transcription start site region 109379
Cpgi3336 11 78188236 to 78189667 1431 CpG island CpG island 3336
Tssr103237 11 78188422 to 78188447 25 + TSS region transcription start site region 103237
Rab34 11 78188430 to 78192193 3763 + protein coding gene RAB34, member RAS oncogene family
Tssr103238 11 78188452 to 78188483 31 + TSS region transcription start site region 103238
Tssr103239 11 78188737 to 78188787 50 + TSS region transcription start site region 103239
Tssr103240 11 78188806 to 78188835 29 + TSS region transcription start site region 103240
Tssr103241 11 78189079 to 78189101 22 + TSS region transcription start site region 103241
Tssr103242 11 78189111 to 78189126 15 + TSS region transcription start site region 103242
Tssr109380 11 78189379 to 78189402 23 - TSS region transcription start site region 109380
Tssr103243 11 78189596 to 78189608 12 + TSS region transcription start site region 103243
Tssr109381 11 78190130 to 78190142 12 - TSS region transcription start site region 109381
D11Seg7 11 78190420 to 78190555 135 DNA segment DNA segment, Chr 11, Segre 7
Tssr103244 11 78193363 to 78193369 6 + TSS region transcription start site region 103244
Tssr103245 11 78193379 to 78193424 45 + TSS region transcription start site region 103245
Proca1 11 78193392 to 78205763 12371 + protein coding gene protein interacting with cyclin A1
Cpgi3337 11 78194456 to 78194999 543 CpG island CpG island 3337
Tssr103246 11 78194542 to 78194563 21 + TSS region transcription start site region 103246
Tssr103247 11 78194696 to 78194707 11 + TSS region transcription start site region 103247
Tssr103248 11 78194743 to 78194756 13 + TSS region transcription start site region 103248
Tssr103249 11 78194766 to 78194794 28 + TSS region transcription start site region 103249
Tssr103250 11 78194806 to 78194821 15 + TSS region transcription start site region 103250
Cpgi3338 11 78195074 to 78195266 192 CpG island CpG island 3338
D11Seg8 11 78200014 to 78200384 370 DNA segment DNA segment, Chr 11, Segre 8
D11Seg9 11 78205045 to 78205173 128 DNA segment DNA segment, Chr 11, Segre 9
Supt6 11 78206749 to 78245738 38989 - protein coding gene suppressor of Ty 6