Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:78171716-78185820

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nek8 11 78166106 to 78176675 10569 - protein coding gene NIMA (never in mitosis gene a)-related expressed kinase 8
Cpgi3333 11 78176430 to 78177299 869 CpG island CpG island 3333
Tssr109375 11 78176619 to 78176660 41 - TSS region transcription start site region 109375
Tlcd1 11 78176716 to 78180820 4104 + protein coding gene TLC domain containing 1
Tssr103230 11 78176735 to 78176761 26 + TSS region transcription start site region 103230
Tssr109376 11 78176964 to 78176978 14 - TSS region transcription start site region 109376
Tssr103231 11 78177229 to 78177235 6 + TSS region transcription start site region 103231
Cpgi3334 11 78177800 to 78179401 1601 CpG island CpG island 3334
Tssr103232 11 78178105 to 78178147 42 + TSS region transcription start site region 103232
Tssr109377 11 78178523 to 78178596 73 - TSS region transcription start site region 109377
Tssr103233 11 78178676 to 78178695 19 + TSS region transcription start site region 103233
Tssr103234 11 78178703 to 78178772 69 + TSS region transcription start site region 103234
Mir7653 11 78178827 to 78178887 60 + miRNA gene microRNA 7653
Tssr103235 11 78178958 to 78178986 28 + TSS region transcription start site region 103235
Tssr103236 11 78178989 to 78179002 13 + TSS region transcription start site region 103236
Rpl23a 11 78180935 to 78183584 2649 - protein coding gene ribosomal protein L23A
Snord42a 11 78181302 to 78181346 44 - snoRNA gene small nucleolar RNA, C/D box 42A
Snord4a 11 78181687 to 78181756 69 - snoRNA gene small nucleolar RNA, C/D box 4A
Snord42b 11 78183059 to 78183113 54 - snoRNA gene small nucleolar RNA, C/D box 42B
Cpgi3335 11 78183139 to 78183568 429 CpG island CpG island 3335
Tssr109378 11 78183172 to 78183216 44 - TSS region transcription start site region 109378
Tssr109379 11 78183551 to 78183574 23 - TSS region transcription start site region 109379