Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 11:69400807-69569108

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89 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kdm6b 11 69398508 to 69413675 15167 - protein coding gene KDM1 lysine (K)-specific demethylase 6B
Cpgi3127 11 69401269 to 69401620 351 CpG island CpG island 3127
Tssr108655 11 69401338 to 69401367 29 - TSS region transcription start site region 108655
Kdm6bos 11 69401513 to 69402700 1187 + antisense lncRNA gene KDM1 lysine (K)-specific demethylase 6B, opposite strand
Tssr108656 11 69404972 to 69404996 24 - TSS region transcription start site region 108656
Tssr102454 11 69405178 to 69405195 17 + TSS region transcription start site region 102454
Tssr108657 11 69405231 to 69405259 28 - TSS region transcription start site region 108657
Tssr108658 11 69405268 to 69405286 18 - TSS region transcription start site region 108658
Tssr108659 11 69405442 to 69405461 19 - TSS region transcription start site region 108659
Tssr108660 11 69405873 to 69405911 38 - TSS region transcription start site region 108660
Tssr108661 11 69406755 to 69406770 15 - TSS region transcription start site region 108661
Tssr102455 11 69406853 to 69406878 25 + TSS region transcription start site region 102455
Tssr108662 11 69407606 to 69407620 14 - TSS region transcription start site region 108662
Tssr108663 11 69407637 to 69407649 12 - TSS region transcription start site region 108663
Tssr108664 11 69407813 to 69407831 18 - TSS region transcription start site region 108664
Cpgi3128 11 69408519 to 69411903 3384 CpG island CpG island 3128
Tssr108665 11 69408558 to 69408562 4 - TSS region transcription start site region 108665
Tssr3543 11 69408680 to 69408724 44 - TSS region transcription start site region 3543
Tssr102456 11 69408911 to 69408944 33 + TSS region transcription start site region 102456
Tssr108666 11 69409146 to 69409160 14 - TSS region transcription start site region 108666
Tssr102457 11 69409281 to 69409304 23 + TSS region transcription start site region 102457
Tssr108667 11 69409392 to 69409411 19 - TSS region transcription start site region 108667
Tssr108668 11 69409413 to 69409422 9 - TSS region transcription start site region 108668
Tssr108669 11 69409428 to 69409445 17 - TSS region transcription start site region 108669
Tssr108670 11 69409547 to 69409569 22 - TSS region transcription start site region 108670
Tssr102458 11 69409674 to 69409689 15 + TSS region transcription start site region 102458
Tssr102459 11 69409694 to 69409720 26 + TSS region transcription start site region 102459
Tssr102460 11 69409727 to 69409745 18 + TSS region transcription start site region 102460
Tssr102461 11 69409770 to 69409779 9 + TSS region transcription start site region 102461
Tssr102462 11 69409798 to 69409812 14 + TSS region transcription start site region 102462
Tssr108671 11 69409884 to 69409906 22 - TSS region transcription start site region 108671
Tssr108672 11 69410368 to 69410380 12 - TSS region transcription start site region 108672
Tssr108673 11 69410396 to 69410432 36 - TSS region transcription start site region 108673
Tssr108674 11 69410440 to 69410453 13 - TSS region transcription start site region 108674
Tssr102463 11 69410551 to 69410582 31 + TSS region transcription start site region 102463
Tssr108675 11 69410607 to 69410616 9 - TSS region transcription start site region 108675
Tssr108676 11 69410652 to 69410667 15 - TSS region transcription start site region 108676
Tssr108677 11 69410696 to 69410707 11 - TSS region transcription start site region 108677
Tssr108678 11 69410712 to 69410736 24 - TSS region transcription start site region 108678
Tssr102464 11 69410825 to 69410854 29 + TSS region transcription start site region 102464
Tssr102465 11 69410944 to 69410975 31 + TSS region transcription start site region 102465
Tssr108679 11 69411011 to 69411041 30 - TSS region transcription start site region 108679
Tssr102466 11 69411101 to 69411116 15 + TSS region transcription start site region 102466
Tssr102467 11 69411319 to 69411342 23 + TSS region transcription start site region 102467
Tssr102468 11 69411355 to 69411383 28 + TSS region transcription start site region 102468
Tssr102469 11 69411397 to 69411412 15 + TSS region transcription start site region 102469
Tssr108680 11 69411665 to 69411678 13 - TSS region transcription start site region 108680
Tssr108681 11 69411696 to 69411721 25 - TSS region transcription start site region 108681
Tssr108682 11 69411739 to 69411754 15 - TSS region transcription start site region 108682
Tssr102470 11 69411965 to 69411986 21 + TSS region transcription start site region 102470
Tssr108683 11 69413257 to 69413298 41 - TSS region transcription start site region 108683
Tssr108684 11 69414106 to 69414112 6 - TSS region transcription start site region 108684
Gm51903 11 69415513 to 69420803 5290 + lncRNA gene predicted gene, 51903
Cpgi3129 11 69415852 to 69416006 154 CpG island CpG island 3129
Tssr108685 11 69416145 to 69416167 22 - TSS region transcription start site region 108685
Tssr108686 11 69416188 to 69416227 39 - TSS region transcription start site region 108686
Cpgi3130 11 69417691 to 69419270 1579 CpG island CpG island 3130
Tssr108687 11 69418134 to 69418147 13 - TSS region transcription start site region 108687
Tssr102471 11 69418253 to 69418266 13 + TSS region transcription start site region 102471
Tssr102472 11 69419148 to 69419173 25 + TSS region transcription start site region 102472
Cpgi3131 11 69419570 to 69419908 338 CpG island CpG island 3131
Tssr108688 11 69420328 to 69420353 25 - TSS region transcription start site region 108688
Dnah2 11 69420807 to 69549108 128301 - protein coding gene dynein, axonemal, heavy chain 2
Tssr102473 11 69423335 to 69423338 3 + TSS region transcription start site region 102473
Tssr108689 11 69423862 to 69423867 5 - TSS region transcription start site region 108689
Tssr108690 11 69423884 to 69423892 8 - TSS region transcription start site region 108690
Tssr108691 11 69423908 to 69423911 3 - TSS region transcription start site region 108691
Tssr108692 11 69423928 to 69423953 25 - TSS region transcription start site region 108692
Tssr108693 11 69423971 to 69423977 6 - TSS region transcription start site region 108693
Tssr108694 11 69423991 to 69424012 21 - TSS region transcription start site region 108694
Tssr108695 11 69433105 to 69433114 9 - TSS region transcription start site region 108695
Tssr102474 11 69443643 to 69443648 5 + TSS region transcription start site region 102474
Dnah2os 11 69448548 to 69453676 5128 + antisense lncRNA gene dynein, axonemal, heavy chain 2, opposite strand
Gm27493 11 69505358 to 69505435 77 - miRNA gene predicted gene, 27493
Tssr108696 11 69523224 to 69523228 4 - TSS region transcription start site region 108696
D11Mit298.5 11 69526353 to 69526478 125 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 298.5
D11Mit298 11 69526464 to 69526662 198 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 298
Cpgi3132 11 69546417 to 69546921 504 CpG island CpG island 3132
Tssr108697 11 69546484 to 69546528 44 - TSS region transcription start site region 108697
Efnb3 11 69554092 to 69560205 6113 - protein coding gene ephrin B3
Tssr108698 11 69554771 to 69554811 40 - TSS region transcription start site region 108698
Tssr108699 11 69555566 to 69555613 47 - TSS region transcription start site region 108699
Tssr108700 11 69555778 to 69555789 11 - TSS region transcription start site region 108700
Tssr108701 11 69555973 to 69556009 36 - TSS region transcription start site region 108701
Cpgi3133 11 69559781 to 69560596 815 CpG island CpG island 3133
Tssr108702 11 69560170 to 69560185 15 - TSS region transcription start site region 108702
Tssr108703 11 69560186 to 69560213 27 - TSS region transcription start site region 108703
Tssr108704 11 69560224 to 69560235 11 - TSS region transcription start site region 108704
Wrap53 11 69561754 to 69580250 18496 - protein coding gene WD repeat containing, antisense to Trp53