Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:109445855-109478598

23 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Amz2	11	109425946 to 109452813	26867	+	protein coding gene	archaelysin family metallopeptidase 2
Gm45916	11	109440078 to 109453359	13281	+	lncRNA gene	predicted gene, 45916
Slc16a6	11	109450855 to 109473596	22741	-	protein coding gene	solute carrier family 16 (monocarboxylic acid transporters), member 6
Tssr105680	11	109452731 to 109452749	18	+	TSS region	transcription start site region 105680
Tssr111541	11	109452867 to 109452885	18	-	TSS region	transcription start site region 111541
Tssr111542	11	109453072 to 109453082	10	-	TSS region	transcription start site region 111542
Cpgi4056	11	109454953 to 109455309	356		CpG island	CpG island 4056
Gm25540	11	109466311 to 109466431	120	-	miRNA gene	predicted gene, 25540
Cpgi4057	11	109472100 to 109472772	672		CpG island	CpG island 4057
Tssr105681	11	109472236 to 109472247	11	+	TSS region	transcription start site region 105681
Tssr111543	11	109472580 to 109472591	11	-	TSS region	transcription start site region 111543
Tssr111544	11	109472611 to 109472639	28	-	TSS region	transcription start site region 111544
Tssr111545	11	109472972 to 109472991	19	-	TSS region	transcription start site region 111545
Cpgi4058	11	109472981 to 109474312	1331		CpG island	CpG island 4058
Tssr111546	11	109473036 to 109473050	14	-	TSS region	transcription start site region 111546
Tssr111547	11	109473065 to 109473079	14	-	TSS region	transcription start site region 111547
Tssr111548	11	109473093 to 109473112	19	-	TSS region	transcription start site region 111548
Tssr111549	11	109473133 to 109473153	20	-	TSS region	transcription start site region 111549
Tssr111550	11	109473220 to 109473278	58	-	TSS region	transcription start site region 111550
Arsg	11	109473374 to 109573330	99956	+	protein coding gene	arylsulfatase G
Tssr111551	11	109473656 to 109473666	10	-	TSS region	transcription start site region 111551
Tssr111552	11	109473735 to 109473746	11	-	TSS region	transcription start site region 111552
Tssr111553	11	109473761 to 109473785	24	-	TSS region	transcription start site region 111553