Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Cep95 | 11 | 29635 | + | protein coding gene | centrosomal protein 95 | |
D11Mit290 | 11 | 174 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 290 | ||
Gm11706 | 11 | 1338 | - | antisense lncRNA gene | predicted gene 11706 | |
Smurf2 | 11 | 100649 | - | protein coding gene | SMAD specific E3 ubiquitin protein ligase 2 | |
Tssr111419 | 11 | 3 | - | TSS region | transcription start site region 111419 | |
Tssr111420 | 11 | 4 | - | TSS region | transcription start site region 111420 | |
Tssr111421 | 11 | 4 | - | TSS region | transcription start site region 111421 | |
Tssr111422 | 11 | 4 | - | TSS region | transcription start site region 111422 | |
Cpgi4029 | 11 | 1542 | CpG island | CpG island 4029 | ||
Tssr111423 | 11 | 35 | - | TSS region | transcription start site region 111423 | |
Gm27322 | 11 | 103 | - | miRNA gene | predicted gene, 27322 | |
Tssr111424 | 11 | 54 | - | TSS region | transcription start site region 111424 | |
D11Mit223 | 11 | 146 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 223 | ||
Tssr111425 | 11 | 21 | - | TSS region | transcription start site region 111425 | |
Gm11707 | 11 | 1032 | - | lincRNA gene | predicted gene 11707 | |
Gm8339 | 11 | 1091 | + | pseudogene | predicted gene 8339 | |
Tssr111426 | 11 | 20 | - | TSS region | transcription start site region 111426 | |
Tssr111427 | 11 | 12 | - | TSS region | transcription start site region 111427 | |
Ewc5 | 11 | 0 | QTL | ethanol withdrawal and consumption 5 | ||
Kpna2 | 11 | 10896 | - | protein coding gene | karyopherin (importin) alpha 2 | |
Tssr111428 | 11 | 5 | - | TSS region | transcription start site region 111428 | |
Tssr111429 | 11 | 14 | - | TSS region | transcription start site region 111429 | |
Tssr111430 | 11 | 17 | - | TSS region | transcription start site region 111430 | |
Tssr111431 | 11 | 8 | - | TSS region | transcription start site region 111431 | |
Cpgi4030 | 11 | 1122 | CpG island | CpG island 4030 | ||
Tssr111432 | 11 | 12 | - | TSS region | transcription start site region 111432 | |
Tssr111433 | 11 | 21 | - | TSS region | transcription start site region 111433 | |
Tssr105560 | 11 | 5 | + | TSS region | transcription start site region 105560 | |
Tssr105561 | 11 | 38 | + | TSS region | transcription start site region 105561 | |
Gm11708 | 11 | 828 | - | pseudogene | predicted gene 11708 | |
Gm39424 | 11 | 2886 | + | lncRNA gene | predicted gene, 39424 | |
Cpgi4031 | 11 | 366 | CpG island | CpG island 4031 | ||
Tssr111434 | 11 | 47 | - | TSS region | transcription start site region 111434 | |
n-TRccg1 | 11 | 72 | + | tRNA gene | nuclear encoded tRNA arginine 1 (anticodon CCG) | |
Tssr105562 | 11 | 4 | + | TSS region | transcription start site region 105562 | |
Tssr111435 | 11 | 4 | - | TSS region | transcription start site region 111435 | |
Tssr105563 | 11 | 7 | + | TSS region | transcription start site region 105563 | |
Tssr105564 | 11 | 11 | + | TSS region | transcription start site region 105564 | |
Tssr105565 | 11 | 26 | + | TSS region | transcription start site region 105565 | |
1810010H24Rik | 11 | 4762 | + | protein coding gene | RIKEN cDNA 1810010H24 gene | |
Cpgi4032 | 11 | 618 | CpG island | CpG island 4032 | ||
Tssr105566 | 11 | 39 | + | TSS region | transcription start site region 105566 | |
Tssr105567 | 11 | 23 | + | TSS region | transcription start site region 105567 | |
Gm36273 | 11 | 856 | - | lncRNA gene | predicted gene, 36273 | |
Cpgi4033 | 11 | 1092 | CpG island | CpG island 4033 | ||
Cpgi4034 | 11 | 233 | CpG island | CpG island 4034 | ||
Bptf | 11 | 98841 | - | protein coding gene | bromodomain PHD finger transcription factor | |
Tssr111436 | 11 | 25 | - | TSS region | transcription start site region 111436 | |
Tssr111437 | 11 | 18 | - | TSS region | transcription start site region 111437 | |
Gm4098 | 11 | 4595 | pseudogene | predicted gene 4098 | ||
Cpgi4035 | 11 | 1613 | CpG island | CpG island 4035 | ||
Tssr111438 | 11 | 43 | - | TSS region | transcription start site region 111438 | |
Tssr111439 | 11 | 11 | - | TSS region | transcription start site region 111439 | |
Tssr111440 | 11 | 11 | - | TSS region | transcription start site region 111440 | |
Tssr111441 | 11 | 52 | - | TSS region | transcription start site region 111441 | |
Tssr111442 | 11 | 28 | - | TSS region | transcription start site region 111442 | |
Tssr111443 | 11 | 17 | - | TSS region | transcription start site region 111443 | |
Tssr111444 | 11 | 25 | - | TSS region | transcription start site region 111444 | |
Tssr105568 | 11 | 46 | + | TSS region | transcription start site region 105568 | |
Gm11715 | 11 | 9717 | + | antisense lncRNA gene | predicted gene 11715 | |
Nol11 | 11 | 22718 | - | protein coding gene | nucleolar protein 11 | |
Rps12-ps26 | 11 | 332 | - | pseudogene | ribosomal protein S12, pseudogene 26 | |
Gm18096 | 11 | 802 | + | pseudogene | predicted gene, 18096 | |
Cpgi4036 | 11 | 930 | CpG island | CpG island 4036 | ||
Tssr111445 | 11 | 52 | - | TSS region | transcription start site region 111445 | |
Tssr111446 | 11 | 15 | - | TSS region | transcription start site region 111446 | |
Tssr105569 | 11 | 11 | + | TSS region | transcription start site region 105569 | |
Gm39425 | 11 | 16408 | + | lncRNA gene | predicted gene, 39425 | |
Gm11718 | 11 | 536 | + | pseudogene | predicted gene 11718 | |
Tssr105570 | 11 | 14 | + | TSS region | transcription start site region 105570 | |
Tssr105571 | 11 | 11 | + | TSS region | transcription start site region 105571 | |
Pitpnc1 | 11 | 262807 | - | protein coding gene | phosphatidylinositol transfer protein, cytoplasmic 1 | |
Tssr111447 | 11 | 4 | - | TSS region | transcription start site region 111447 | |
Tssr111448 | 11 | 5 | - | TSS region | transcription start site region 111448 | |
5830433D23Rik | 11 | 1442 | unclassified gene | RIKEN cDNA 5830433D23 gene | ||
Tssr111449 | 11 | 4 | - | TSS region | transcription start site region 111449 | |
Tssr111450 | 11 | 23 | - | TSS region | transcription start site region 111450 | |
Gm11719 | 11 | 350 | + | pseudogene | predicted gene 11719 | |
Tssr105572 | 11 | 15 | + | TSS region | transcription start site region 105572 | |
Tssr105573 | 11 | 14 | + | TSS region | transcription start site region 105573 | |
Tssr105574 | 11 | 16 | + | TSS region | transcription start site region 105574 | |
Tssr105575 | 11 | 8 | + | TSS region | transcription start site region 105575 | |
Tssr111451 | 11 | 28 | - | TSS region | transcription start site region 111451 | |
Tssr111452 | 11 | 42 | - | TSS region | transcription start site region 111452 | |
Tssr111453 | 11 | 39 | - | TSS region | transcription start site region 111453 | |
Tssr111454 | 11 | 27 | - | TSS region | transcription start site region 111454 | |
Tssr105576 | 11 | 10 | + | TSS region | transcription start site region 105576 | |
Tssr105577 | 11 | 19 | + | TSS region | transcription start site region 105577 | |
Tssr105578 | 11 | 18 | + | TSS region | transcription start site region 105578 | |
Tssr105579 | 11 | 13 | + | TSS region | transcription start site region 105579 | |
Gm11716 | 11 | 6754 | + | antisense lncRNA gene | predicted gene 11716 | |
Tssr111455 | 11 | 27 | - | TSS region | transcription start site region 111455 | |
Tssr111456 | 11 | 18 | - | TSS region | transcription start site region 111456 | |
Tssr105580 | 11 | 9 | + | TSS region | transcription start site region 105580 | |
Gm11712 | 11 | 1988 | + | antisense lncRNA gene | predicted gene 11712 | |
Tssr111457 | 11 | 22 | - | TSS region | transcription start site region 111457 | |
Gm11713 | 11 | 3159 | + | antisense lncRNA gene | predicted gene 11713 | |
Tssr111458 | 11 | 12 | - | TSS region | transcription start site region 111458 | |
Tssr111459 | 11 | 37 | - | TSS region | transcription start site region 111459 | |
Tssr105581 | 11 | 20 | + | TSS region | transcription start site region 105581 | |
Tssr111460 | 11 | 4 | - | TSS region | transcription start site region 111460 | |
Tssr111461 | 11 | 12 | - | TSS region | transcription start site region 111461 | |
Tssr105582 | 11 | 10 | + | TSS region | transcription start site region 105582 | |
Tssr105583 | 11 | 15 | + | TSS region | transcription start site region 105583 | |
Tssr105584 | 11 | 10 | + | TSS region | transcription start site region 105584 | |
Gm11714 | 11 | 7410 | + | lncRNA gene | predicted gene 11714 | |
Tssr105585 | 11 | 11 | + | TSS region | transcription start site region 105585 | |
Tssr105586 | 11 | 32 | + | TSS region | transcription start site region 105586 | |
Tssr111462 | 11 | 17 | - | TSS region | transcription start site region 111462 | |
Tssr111463 | 11 | 15 | - | TSS region | transcription start site region 111463 | |
Tssr111464 | 11 | 5 | - | TSS region | transcription start site region 111464 | |
Tssr111465 | 11 | 4 | - | TSS region | transcription start site region 111465 | |
Cpgi4037 | 11 | 2028 | CpG island | CpG island 4037 | ||
Tssr111466 | 11 | 23 | - | TSS region | transcription start site region 111466 | |
Tssr111467 | 11 | 15 | - | TSS region | transcription start site region 111467 | |
Tssr111468 | 11 | 13 | - | TSS region | transcription start site region 111468 | |
Tssr111469 | 11 | 15 | - | TSS region | transcription start site region 111469 | |
Tssr111470 | 11 | 18 | - | TSS region | transcription start site region 111470 | |
Tssr111471 | 11 | 11 | - | TSS region | transcription start site region 111471 | |
Tssr105587 | 11 | 6 | + | TSS region | transcription start site region 105587 | |
Cpgi4038 | 11 | 664 | CpG island | CpG island 4038 | ||
Tssr105588 | 11 | 66 | + | TSS region | transcription start site region 105588 | |
Psmd12 | 11 | 18508 | + | protein coding gene | proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 | |
Tssr105589 | 11 | 16 | + | TSS region | transcription start site region 105589 | |
Gm11722 | 11 | 1191 | + | sense intronic lncRNA gene | predicted gene 11722 | |
C330019F10Rik | 11 | 15817 | - | lincRNA gene | RIKEN cDNA C330019F10 gene | |
A830035A12Rik | 11 | 7637 | - | unclassified non-coding RNA gene | RIKEN cDNA A830035A12 gene | |
Gm11649 | 11 | 374 | - | pseudogene | predicted gene 11649 | |
Gm39426 | 11 | 1897 | - | lncRNA gene | predicted gene, 39426 | |
Cpgi4039 | 11 | 2006 | CpG island | CpG island 4039 | ||
Tssr105590 | 11 | 44 | + | TSS region | transcription start site region 105590 | |
Tssr105591 | 11 | 21 | + | TSS region | transcription start site region 105591 | |
Tssr105592 | 11 | 44 | + | TSS region | transcription start site region 105592 | |
Tssr105593 | 11 | 34 | + | TSS region | transcription start site region 105593 | |
Helz | 11 | 145896 | + | protein coding gene | helicase with zinc finger domain | |
Tssr105594 | 11 | 6 | + | TSS region | transcription start site region 105594 | |
Tssr111472 | 11 | 1 | - | TSS region | transcription start site region 111472 | |
Tssr105595 | 11 | 3 | + | TSS region | transcription start site region 105595 | |
Mir6932 | 11 | 57 | + | miRNA gene | microRNA 6932 | |
Cpgi4040 | 11 | 209 | CpG island | CpG island 4040 | ||
Cacng1 | 11 | 13258 | - | protein coding gene | calcium channel, voltage-dependent, gamma subunit 1 | |
Cpgi4041 | 11 | 156 | CpG island | CpG island 4041 | ||
Tssr111473 | 11 | 7 | - | TSS region | transcription start site region 111473 | |
Tssr111474 | 11 | 16 | - | TSS region | transcription start site region 111474 | |
Tssr111475 | 11 | 3 | - | TSS region | transcription start site region 111475 | |
Tssr111476 | 11 | 58 | - | TSS region | transcription start site region 111476 | |
Tssr111477 | 11 | 11 | - | TSS region | transcription start site region 111477 | |
Tssr111478 | 11 | 13 | - | TSS region | transcription start site region 111478 | |
Tssr111479 | 11 | 11 | - | TSS region | transcription start site region 111479 | |
D11Mit258 | 11 | 128 | DNA segment | DNA segment, Chr 11, Massachusetts Institute of Technology 258 | ||
Hmtb6 | 11 | 2903486 | QTL | hemostasis and thrombosis rebleeding time 6 | ||
Lore4 | 11 | -28460463 | QTL | loss of righting induced by ethanol 4 | ||
Tssr111480 | 11 | 17 | - | TSS region | transcription start site region 111480 | |
Tssr111481 | 11 | 28 | - | TSS region | transcription start site region 111481 | |
Tssr111482 | 11 | 23 | - | TSS region | transcription start site region 111482 | |
Tssr111483 | 11 | 9 | - | TSS region | transcription start site region 111483 | |
Cacng4 | 11 | 59684 | - | protein coding gene | calcium channel, voltage-dependent, gamma subunit 4 | |
Tssr111484 | 11 | 25 | - | TSS region | transcription start site region 111484 | |
Tssr111485 | 11 | 25 | - | TSS region | transcription start site region 111485 | |
Cpgi4042 | 11 | 2396 | CpG island | CpG island 4042 | ||
Gm11650 | 11 | 2116 | + | lncRNA gene | predicted gene 11650 | |
Tssr105596 | 11 | 11 | + | TSS region | transcription start site region 105596 | |
Tssr111486 | 11 | 15 | - | TSS region | transcription start site region 111486 | |
Tssr111487 | 11 | 70 | - | TSS region | transcription start site region 111487 | |
Tssr111488 | 11 | 14 | - | TSS region | transcription start site region 111488 | |
Gm23120 | 11 | 286 | + | unclassified non-coding RNA gene | predicted gene, 23120 | |
Gm27595 | 11 | 111 | + | rRNA gene | predicted gene, 27595 | |
Cacng5 | 11 | 40450 | - | protein coding gene | calcium channel, voltage-dependent, gamma subunit 5 | |
Cpgi4043 | 11 | 699 | CpG island | CpG island 4043 | ||
Tssr111489 | 11 | 33 | - | TSS region | transcription start site region 111489 | |
Tssr111490 | 11 | 28 | - | TSS region | transcription start site region 111490 | |
Prkca | 11 | 410501 | - | protein coding gene | protein kinase C, alpha | |
Gm10838 | 11 | 4250 | unclassified gene | predicted gene 10838 | ||
Tssr105597 | 11 | 9 | + | TSS region | transcription start site region 105597 | |
Tssr105598 | 11 | 19 | + | TSS region | transcription start site region 105598 | |
Gm11657 | 11 | 609 | + | antisense lncRNA gene | predicted gene 11657 | |
Tssr105599 | 11 | 6 | + | TSS region | transcription start site region 105599 | |
Mir7223 | 11 | 68 | + | miRNA gene | microRNA 7223 | |
Cpgi4044 | 11 | 338 | CpG island | CpG island 4044 | ||
Tssr111491 | 11 | 5 | - | TSS region | transcription start site region 111491 | |
Tssr105600 | 11 | 2 | + | TSS region | transcription start site region 105600 | |
Tssr3708 | 11 | 33 | + | TSS region | transcription start site region 3708 | |
Gm11655 | 11 | 12276 | + | antisense lncRNA gene | predicted gene 11655 | |
Tssr3709 | 11 | 14 | + | TSS region | transcription start site region 3709 | |
Tssr111492 | 11 | 5 | - | TSS region | transcription start site region 111492 | |
Tssr111493 | 11 | 20 | - | TSS region | transcription start site region 111493 | |
Tssr111494 | 11 | 3 | - | TSS region | transcription start site region 111494 | |
Tssr111495 | 11 | 8 | - | TSS region | transcription start site region 111495 | |
Tssr111496 | 11 | 19 | - | TSS region | transcription start site region 111496 | |
Tssr111497 | 11 | 11 | - | TSS region | transcription start site region 111497 | |
Tssr111498 | 11 | 72 | - | TSS region | transcription start site region 111498 | |
Tssr111499 | 11 | 4 | - | TSS region | transcription start site region 111499 | |
Tssr111500 | 11 | 42 | - | TSS region | transcription start site region 111500 | |
Tssr111501 | 11 | 5 | - | TSS region | transcription start site region 111501 | |
Tssr111502 | 11 | 4 | - | TSS region | transcription start site region 111502 |