Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:100535794-100576115

16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
n-TSgga1	11	100538158 to 100538230	72	+	tRNA gene	nuclear encoded tRNA serine 1 (anticodon GGA)
Cpgi3816	11	100545421 to 100545945	524		CpG island	CpG island 3816
Tssr110829	11	100545579 to 100545593	14	-	TSS region	transcription start site region 110829
Ttc25	11	100545632 to 100572566	26934	+	protein coding gene	tetratricopeptide repeat domain 25
Tssr104940	11	100545672 to 100545678	6	+	TSS region	transcription start site region 104940
Tssr104941	11	100545683 to 100545736	53	+	TSS region	transcription start site region 104941
Tssr104942	11	100553339 to 100553343	4	+	TSS region	transcription start site region 104942
Tssr104943	11	100553999 to 100554018	19	+	TSS region	transcription start site region 104943
Cpgi3817	11	100555794 to 100556115	321		CpG island	CpG island 3817
Cpgi3818	11	100564372 to 100564704	332		CpG island	CpG island 3818
Cpgi3819	11	100571234 to 100571412	178		CpG island	CpG island 3819
Cpgi3820	11	100574733 to 100575392	659		CpG island	CpG island 3820
Cnp	11	100574909 to 100591418	16509	+	protein coding gene	2',3'-cyclic nucleotide 3' phosphodiesterase
Tssr104944	11	100574965 to 100574982	17	+	TSS region	transcription start site region 104944
Tssr104945	11	100575797 to 100575815	18	+	TSS region	transcription start site region 104945
Tssr104946	11	100575882 to 100575900	18	+	TSS region	transcription start site region 104946