Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:90705733-91125739

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ssrq4 10 82655104 to 91020240 8365136 QTL stress response QTL 4
Anks1b 10 89873509 to 90973300 1099791 + protein coding gene ankyrin repeat and sterile alpha motif domain containing 1B
Gm47591 10 90728960 to 90736330 7370 + sense intronic lncRNA gene predicted gene, 47591
Tssr95201 10 90747670 to 90747672 2 + TSS region transcription start site region 95201
Gm18670 10 90750025 to 90750687 662 - pseudogene predicted gene, 18670
Gm47589 10 90750872 to 90751066 194 - pseudogene predicted gene, 47589
Gm47592 10 90813083 to 90814389 1306 + unclassified gene predicted gene, 47592
Cpgi2097 10 90828480 to 90829952 1472 CpG island CpG island 2097
Tssr95202 10 90828897 to 90828926 29 + TSS region transcription start site region 95202
Tssr95203 10 90828931 to 90828947 16 + TSS region transcription start site region 95203
Tssr95204 10 90829409 to 90829481 72 + TSS region transcription start site region 95204
Tssr95205 10 90829538 to 90829556 18 + TSS region transcription start site region 95205
Tssr95206 10 90829642 to 90829658 16 + TSS region transcription start site region 95206
Tssr95207 10 90829780 to 90829791 11 + TSS region transcription start site region 95207
Tssr95208 10 90829835 to 90829848 13 + TSS region transcription start site region 95208
Tssr95209 10 90829982 to 90829986 4 + TSS region transcription start site region 95209
Tssr95210 10 90834237 to 90834239 2 + TSS region transcription start site region 95210
Tssr95211 10 90837820 to 90837823 3 + TSS region transcription start site region 95211
Gm47590 10 90851099 to 90854074 2975 + unclassified gene predicted gene, 47590
Tssr95212 10 90875137 to 90875148 11 + TSS region transcription start site region 95212
Tssr95213 10 90875639 to 90875643 4 + TSS region transcription start site region 95213
Tssr95214 10 90877321 to 90877325 4 + TSS region transcription start site region 95214
Tssr3316 10 90892626 to 90892634 8 - TSS region transcription start site region 3316
Tssr95215 10 90907702 to 90907705 3 + TSS region transcription start site region 95215
Tssr95216 10 90915733 to 90915739 6 + TSS region transcription start site region 95216
Tssr95217 10 90917751 to 90917756 5 + TSS region transcription start site region 95217
Tssr95218 10 90918161 to 90918166 5 + TSS region transcription start site region 95218
Tssr95219 10 90934776 to 90934780 4 + TSS region transcription start site region 95219
Tssr95220 10 90936739 to 90936751 12 + TSS region transcription start site region 95220
Cpgi2098 10 90969235 to 90970256 1021 CpG island CpG island 2098
Tssr95221 10 90970239 to 90970279 40 + TSS region transcription start site region 95221
Apaf1 10 90989311 to 91082743 93432 - protein coding gene apoptotic peptidase activating factor 1
Tssr98897 10 91001371 to 91001381 10 - TSS region transcription start site region 98897
Gm25390 10 91005741 to 91005843 102 + snRNA gene predicted gene, 25390
Tssr98898 10 91007317 to 91007325 8 - TSS region transcription start site region 98898
D10Mit231 10 91020120 to 91020240 120 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 231
Tssr3317 10 91040049 to 91040052 3 + TSS region transcription start site region 3317
Tssr98899 10 91045932 to 91045936 4 - TSS region transcription start site region 98899
Tssr95222 10 91082091 to 91082103 12 + TSS region transcription start site region 95222
Cpgi2099 10 91082183 to 91083536 1353 CpG island CpG island 2099
Tssr98900 10 91082556 to 91082577 21 - TSS region transcription start site region 98900
Tssr98901 10 91082653 to 91082661 8 - TSS region transcription start site region 98901
Tssr98902 10 91082683 to 91082700 17 - TSS region transcription start site region 98902
Tssr98903 10 91082704 to 91082773 69 - TSS region transcription start site region 98903
Tssr98904 10 91082783 to 91082807 24 - TSS region transcription start site region 98904
Ikbip 10 91082940 to 91102607 19667 + protein coding gene IKBKB interacting protein
Tssr95223 10 91083024 to 91083028 4 + TSS region transcription start site region 95223
Tssr95224 10 91083036 to 91083075 39 + TSS region transcription start site region 95224
Tssr95225 10 91083081 to 91083103 22 + TSS region transcription start site region 95225
Tssr95226 10 91096694 to 91096697 3 + TSS region transcription start site region 95226
Tssr95227 10 91097129 to 91097140 11 + TSS region transcription start site region 95227
Cpgi2100 10 91102047 to 91102219 172 CpG island CpG island 2100
A930036M01Rik 10 91113784 to 91114246 462 unclassified non-coding RNA gene RIKEN cDNA A930036M01 gene
Slc25a3 10 91116578 to 91124001 7423 - protein coding gene solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
Tssr95228 10 91116787 to 91116809 22 + TSS region transcription start site region 95228
Tssr98905 10 91118197 to 91118211 14 - TSS region transcription start site region 98905
Gm24119 10 91118291 to 91118536 245 - snoRNA gene predicted gene, 24119
Tssr98906 10 91121946 to 91121994 48 - TSS region transcription start site region 98906
Tssr98907 10 91122856 to 91122872 16 - TSS region transcription start site region 98907
Cpgi2101 10 91123239 to 91124297 1058 CpG island CpG island 2101
Tssr98908 10 91123262 to 91123315 53 - TSS region transcription start site region 98908
Tssr95229 10 91123397 to 91123414 17 + TSS region transcription start site region 95229
Tssr95230 10 91123419 to 91123433 14 + TSS region transcription start site region 95230
Tssr98909 10 91123955 to 91124044 89 - TSS region transcription start site region 98909
Lgth11 10 121000000 to 91000000 -30000000 QTL body length 11