Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:87440819-87543660

19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr3307	10	87456136 to 87456161	25	+	TSS region	transcription start site region 3307
Cpgi2073	10	87486091 to 87486592	501		CpG island	CpG island 2073
Ascl1	10	87491041 to 87493660	2619	-	protein coding gene	achaete-scute family bHLH transcription factor 1
Tssr98805	10	87491459 to 87491486	27	-	TSS region	transcription start site region 98805
Tssr98806	10	87491863 to 87491874	11	-	TSS region	transcription start site region 98806
Cpgi2074	10	87492237 to 87494169	1932		CpG island	CpG island 2074
Tssr98807	10	87492482 to 87492493	11	-	TSS region	transcription start site region 98807
Tssr98808	10	87492759 to 87492771	12	-	TSS region	transcription start site region 98808
Tssr98809	10	87492796 to 87492834	38	-	TSS region	transcription start site region 98809
Tssr98810	10	87493651 to 87493666	15	-	TSS region	transcription start site region 98810
Cpgi2075	10	87494675 to 87494943	268		CpG island	CpG island 2075
Gm29915	10	87502828 to 87508622	5794	-	lncRNA gene	predicted gene, 29915
Gm48120	10	87507862 to 87508485	623	+	pseudogene	predicted gene, 48120
Tssr95020	10	87518931 to 87518936	5	+	TSS region	transcription start site region 95020
Pah	10	87521795 to 87584136	62341	+	protein coding gene	phenylalanine hydroxylase
Tssr95021	10	87521893 to 87521917	24	+	TSS region	transcription start site region 95021
Tssr95022	10	87521920 to 87521937	17	+	TSS region	transcription start site region 95022
Tssr95023	10	87521954 to 87521977	23	+	TSS region	transcription start site region 95023
Tssr95024	10	87533366 to 87533391	25	+	TSS region	transcription start site region 95024