Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:81024609-81115540

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Diras1 10 81019589 to 81025662 6073 - protein coding gene DIRAS family, GTP-binding RAS-like 1
Cpgi1935 10 81024768 to 81025721 953 CpG island CpG island 1935
Gm16099 10 81024811 to 81026567 1756 + antisense lncRNA gene predicted gene 16099
Tssr98545 10 81025363 to 81025402 39 - TSS region transcription start site region 98545
Tssr98546 10 81025406 to 81025411 5 - TSS region transcription start site region 98546
Tssr98547 10 81025521 to 81025559 38 - TSS region transcription start site region 98547
Tssr98548 10 81025804 to 81025821 17 - TSS region transcription start site region 98548
Tssr98549 10 81026185 to 81026204 19 - TSS region transcription start site region 98549
Slc39a3 10 81028540 to 81037421 8881 - protein coding gene solute carrier family 39 (zinc transporter), member 3
Cpgi1936 10 81036985 to 81037538 553 CpG island CpG island 1936
Tssr98550 10 81037258 to 81037295 37 - TSS region transcription start site region 98550
Tssr98551 10 81037300 to 81037339 39 - TSS region transcription start site region 98551
Sgta 10 81044075 to 81060181 16106 - protein coding gene small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
Tssr98552 10 81050995 to 81050999 4 - TSS region transcription start site region 98552
Tssr3281 10 81057523 to 81057527 4 + TSS region transcription start site region 3281
Cpgi1937 10 81059778 to 81060446 668 CpG island CpG island 1937
Tssr98553 10 81060134 to 81060204 70 - TSS region transcription start site region 98553
Cpgi1938 10 81069609 to 81070540 931 CpG island CpG island 1938
Tssr94665 10 81070037 to 81070046 9 + TSS region transcription start site region 94665
Tssr94666 10 81070062 to 81070121 59 + TSS region transcription start site region 94666
Thop1 10 81070083 to 81082360 12277 + protein coding gene thimet oligopeptidase 1
Tssr94667 10 81070138 to 81070153 15 + TSS region transcription start site region 94667
Tssr94668 10 81070235 to 81070246 11 + TSS region transcription start site region 94668
Tssr94669 10 81075513 to 81075541 28 + TSS region transcription start site region 94669
Cpgi1939 10 81080029 to 81080638 609 CpG island CpG island 1939
Creb3l3 10 81084333 to 81098872 14539 - protein coding gene cAMP responsive element binding protein 3-like 3
Tssr98554 10 81089333 to 81089342 9 - TSS region transcription start site region 98554
Tssr98555 10 81092540 to 81092546 6 - TSS region transcription start site region 98555
Tssr98556 10 81092554 to 81092561 7 - TSS region transcription start site region 98556
Tssr98557 10 81092575 to 81092633 58 - TSS region transcription start site region 98557
Tssr98558 10 81092653 to 81092664 11 - TSS region transcription start site region 98558
D10Mit7 10 81098438 to 81098583 145 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 7
Tssr94670 10 81102683 to 81102688 5 + TSS region transcription start site region 94670
Mir5615-1 10 81104614 to 81104673 59 - miRNA gene microRNA 5615-1
Mir5615-2 10 81104616 to 81104675 59 + miRNA gene microRNA 5615-2
Cpgi1940 10 81105396 to 81106840 1444 CpG island CpG island 1940
Tssr98559 10 81105841 to 81105883 42 - TSS region transcription start site region 98559
Map2k2 10 81105912 to 81124697 18785 + protein coding gene mitogen-activated protein kinase kinase 2
Tssr94671 10 81105918 to 81105932 14 + TSS region transcription start site region 94671
Tssr94672 10 81105933 to 81106004 71 + TSS region transcription start site region 94672