Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:63395080-63775392

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dnajc12 10 63382443 to 63408840 26397 + protein coding gene DnaJ heat shock protein family (Hsp40) member C12
Tssr93760 10 63397237 to 63397264 27 + TSS region transcription start site region 93760
Cpgi1652 10 63412898 to 63413060 162 CpG island CpG island 1652
Gm7530 10 63412999 to 63413603 604 + pseudogene predicted gene 7530
Tssr93761 10 63416365 to 63416366 1 + TSS region transcription start site region 93761
Gm7075 10 63421365 to 63421789 424 - pseudogene predicted gene 7075
Cpgi1653 10 63421658 to 63421811 153 CpG island CpG island 1653
Tssr97917 10 63429435 to 63429437 2 - TSS region transcription start site region 97917
Cpgi1654 10 63429459 to 63430299 840 CpG island CpG island 1654
n-TStga3 10 63429476 to 63429557 81 - tRNA gene nuclear encoded tRNA serine 3 (anticodon TGA)
Tssr93762 10 63430061 to 63430085 24 + TSS region transcription start site region 93762
Tssr93763 10 63430092 to 63430105 13 + TSS region transcription start site region 93763
Ctnna3 10 63430098 to 65003667 1573569 + protein coding gene catenin (cadherin associated protein), alpha 3
Tssr93764 10 63457505 to 63457539 34 + TSS region transcription start site region 93764
Tssr93765 10 63457549 to 63457555 6 + TSS region transcription start site region 93765
Tssr93766 10 63457578 to 63457583 5 + TSS region transcription start site region 93766
Tssr93767 10 63480294 to 63480308 14 + TSS region transcription start site region 93767
Tssr93768 10 63480321 to 63480348 27 + TSS region transcription start site region 93768
Tssr93769 10 63528384 to 63528387 3 + TSS region transcription start site region 93769
Cpgi1655 10 63583603 to 63583899 296 CpG island CpG island 1655
Cpgi1656 10 63585080 to 63585392 312 CpG island CpG island 1656
Tssr93770 10 63638304 to 63638307 3 + TSS region transcription start site region 93770
Tssr93771 10 63655188 to 63655194 6 + TSS region transcription start site region 93771
Tssr93772 10 63683307 to 63683310 3 + TSS region transcription start site region 93772