Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:62542350-62664128

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr93719 10 62543665 to 62543678 13 + TSS region transcription start site region 93719
Tssr93720 10 62543815 to 62543826 11 + TSS region transcription start site region 93720
Tssr3223 10 62553615 to 62553623 8 - TSS region transcription start site region 3223
Kif1bp 10 62558470 to 62578457 19987 - protein coding gene KIF1 binding protein
4933428P19Rik 10 62577694 to 62579069 1375 + antisense lncRNA gene RIKEN cDNA 4933428P19 gene
Cpgi1630 10 62577805 to 62578636 831 CpG island CpG island 1630
Tssr97862 10 62578197 to 62578229 32 - TSS region transcription start site region 97862
Tssr97863 10 62578387 to 62578450 63 - TSS region transcription start site region 97863
Tssr97864 10 62578458 to 62578463 5 - TSS region transcription start site region 97864
Ddx21 10 62580251 to 62602281 22030 - protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 21
Tssr93721 10 62598765 to 62598780 15 + TSS region transcription start site region 93721
Tssr93722 10 62598826 to 62598854 28 + TSS region transcription start site region 93722
Tssr97865 10 62599514 to 62599518 4 - TSS region transcription start site region 97865
Cpgi1631 10 62601918 to 62602883 965 CpG island CpG island 1631
Tssr97866 10 62602261 to 62602291 30 - TSS region transcription start site region 97866
Tssr93723 10 62602331 to 62602368 37 + TSS region transcription start site region 93723
Gm47257 10 62602350 to 62604128 1778 + bidirectional promoter lncRNA gene predicted gene, 47257
Tssr93724 10 62602369 to 62602392 23 + TSS region transcription start site region 93724
Ddx50 10 62615895 to 62651218 35323 - protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
Tssr97867 10 62616413 to 62616416 3 - TSS region transcription start site region 97867
Cpgi1632 10 62650571 to 62651913 1342 CpG island CpG island 1632
Tssr97868 10 62651170 to 62651192 22 - TSS region transcription start site region 97868
Tssr97869 10 62651194 to 62651234 40 - TSS region transcription start site region 97869
Tssr93725 10 62651666 to 62651677 11 + TSS region transcription start site region 93725
Tssr93726 10 62651687 to 62651706 19 + TSS region transcription start site region 93726
Tssr93727 10 62651712 to 62651726 14 + TSS region transcription start site region 93727
Stox1 10 62659043 to 62726099 67056 - protein coding gene storkhead box 1
Tssr97870 10 62664038 to 62664079 41 - TSS region transcription start site region 97870