MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 10:61217799-61377808

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Adamts14	10	61197112 to 61273438	76326	-	protein coding gene	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14
Gm29861	10	61215954 to 61219572	3618	+	lncRNA gene	predicted gene, 29861
Cpgi1603	10	61245772 to 61246165	393		CpG island	CpG island 1603
Cpgi1604	10	61272888 to 61274050	1162		CpG island	CpG island 1604
Tssr97757	10	61273381 to 61273404	23	-	TSS region	transcription start site region 97757
Tssr97758	10	61273409 to 61273453	44	-	TSS region	transcription start site region 97758
Prf1	10	61297546 to 61304263	6717	+	protein coding gene	perforin 1 (pore forming protein)
Tssr93658	10	61297728 to 61297739	11	+	TSS region	transcription start site region 93658
Tssr93659	10	61297749 to 61297788	39	+	TSS region	transcription start site region 93659
Tssr93660	10	61297799 to 61297808	9	+	TSS region	transcription start site region 93660
Tssr93661	10	61297809 to 61297824	15	+	TSS region	transcription start site region 93661
Tssr93662	10	61309802 to 61309808	6	+	TSS region	transcription start site region 93662
Rpl27a-ps1	10	61309830 to 61310277	447	+	pseudogene	ribosomal protein L27A, pseudogene 1
Pald1	10	61319656 to 61383530	63874	-	protein coding gene	phosphatase domain containing, paladin 1
D10Mit48	10	61333715 to 61333893	178		DNA segment	DNA segment, Chr 10, Massachusetts Institute of Technology 48
Tssr3215	10	61352006 to 61352008	2	+	TSS region	transcription start site region 3215
Gm48077	10	61359666 to 61361407	1741	+	unclassified gene	predicted gene, 48077