Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:57385774-57662529

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm9129 10 57386423 to 57391153 4730 + pseudogene predicted gene 9129
Gm19256 10 57413481 to 57413711 230 - pseudogene predicted gene, 19256
4930467K11Rik 10 57478383 to 57486353 7970 - lincRNA gene RIKEN cDNA 4930467K11 gene
Cpgi1552 10 57485970 to 57487090 1120 CpG island CpG island 1552
Tssr93381 10 57486354 to 57486414 60 + TSS region transcription start site region 93381
Hsf2 10 57486385 to 57513135 26750 + protein coding gene heat shock factor 2
Tssr93382 10 57486418 to 57486454 36 + TSS region transcription start site region 93382
Tssr93383 10 57486511 to 57486520 9 + TSS region transcription start site region 93383
Tssr93384 10 57486528 to 57486535 7 + TSS region transcription start site region 93384
Tssr93385 10 57486538 to 57486545 7 + TSS region transcription start site region 93385
Tssr93386 10 57486570 to 57486575 5 + TSS region transcription start site region 93386
9630030I15Rik 10 57506480 to 57508705 2225 unclassified gene RIKEN cDNA 9630030I15 gene
Tssr93387 10 57512484 to 57512489 5 + TSS region transcription start site region 93387
Serinc1 10 57515774 to 57532529 16755 - protein coding gene serine incorporator 1
Tssr97628 10 57516486 to 57516515 29 - TSS region transcription start site region 97628
Tssr97629 10 57516895 to 57516953 58 - TSS region transcription start site region 97629
Tssr97630 10 57516960 to 57516973 13 - TSS region transcription start site region 97630
Tssr97631 10 57517133 to 57517179 46 - TSS region transcription start site region 97631
Tssr97632 10 57517237 to 57517250 13 - TSS region transcription start site region 97632
Tssr97633 10 57522335 to 57522337 2 - TSS region transcription start site region 97633
Tssr97634 10 57528921 to 57528923 2 - TSS region transcription start site region 97634
Tssr97635 10 57531868 to 57531871 3 - TSS region transcription start site region 97635
Cpgi1553 10 57532024 to 57532711 687 CpG island CpG island 1553
Tssr97636 10 57532416 to 57532487 71 - TSS region transcription start site region 97636
Tssr97637 10 57532489 to 57532517 28 - TSS region transcription start site region 97637
Rpl48-ps1 10 57601393 to 57601948 555 + pseudogene ribosomal protein L48, pseudogene 1
Cpgi1554 10 57631935 to 57632479 544 CpG island CpG island 1554
Pkib 10 57631981 to 57741112 109131 + protein coding gene protein kinase inhibitor beta, cAMP dependent, testis specific
Tssr93388 10 57632046 to 57632060 14 + TSS region transcription start site region 93388
Tssr93389 10 57632062 to 57632101 39 + TSS region transcription start site region 93389
Tssr93390 10 57632108 to 57632120 12 + TSS region transcription start site region 93390
Tssr93391 10 57645838 to 57645857 19 + TSS region transcription start site region 93391
Tssr93392 10 57645861 to 57645886 25 + TSS region transcription start site region 93392
Tssr93393 10 57645902 to 57645912 10 + TSS region transcription start site region 93393
Tssr93394 10 57650954 to 57650960 6 + TSS region transcription start site region 93394
Tssr93395 10 57650962 to 57650971 9 + TSS region transcription start site region 93395
Tssr93396 10 57650977 to 57650985 8 + TSS region transcription start site region 93396
Tssr93397 10 57650990 to 57651010 20 + TSS region transcription start site region 93397
Gm18253 10 57657932 to 57658838 906 + pseudogene predicted gene, 18253