Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:5539218-5747617

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Syne1 10 5020192 to 5550692 530500 - protein coding gene spectrin repeat containing, nuclear envelope 1
Tssr96547 10 5548684 to 5548723 39 - TSS region transcription start site region 96547
Tssr92282 10 5548716 to 5548718 2 + TSS region transcription start site region 92282
Tssr92283 10 5548799 to 5548833 34 + TSS region transcription start site region 92283
Cpgi1260 10 5550112 to 5550964 852 CpG island CpG island 1260
Tssr96548 10 5550128 to 5550138 10 - TSS region transcription start site region 96548
Tssr96549 10 5550141 to 5550163 22 - TSS region transcription start site region 96549
Tssr96550 10 5550549 to 5550562 13 - TSS region transcription start site region 96550
Tssr96551 10 5550565 to 5550598 33 - TSS region transcription start site region 96551
Tssr96552 10 5550599 to 5550613 14 - TSS region transcription start site region 96552
Tssr96553 10 5550615 to 5550631 16 - TSS region transcription start site region 96553
Tssr96554 10 5550636 to 5550706 70 - TSS region transcription start site region 96554
Tssr96555 10 5550708 to 5550735 27 - TSS region transcription start site region 96555
Tssr96556 10 5550798 to 5550807 9 - TSS region transcription start site region 96556
Tssr96557 10 5550809 to 5550835 26 - TSS region transcription start site region 96557
Tssr3121 10 5550851 to 5550868 17 - TSS region transcription start site region 3121
Tssr164703 10 5557246 to 5557247 1 - TSS region transcription start site region 164703
Tssr96558 10 5593517 to 5593524 7 - TSS region transcription start site region 96558
Tssr3122 10 5593541 to 5593550 9 - TSS region transcription start site region 3122
Tssr92284 10 5593718 to 5593739 21 + TSS region transcription start site region 92284
Myct1 10 5593728 to 5606789 13061 + protein coding gene myc target 1
Tssr92285 10 5593764 to 5593809 45 + TSS region transcription start site region 92285
Tssr92286 10 5593810 to 5593821 11 + TSS region transcription start site region 92286
Tssr92287 10 5593823 to 5593855 32 + TSS region transcription start site region 92287
Tssr92288 10 5594772 to 5594775 3 + TSS region transcription start site region 92288
Tssr92289 10 5639210 to 5639225 15 + TSS region transcription start site region 92289
Vip 10 5639218 to 5647617 8399 + protein coding gene vasoactive intestinal polypeptide
Tssr92290 10 5664195 to 5664198 3 + TSS region transcription start site region 92290
Tssr96559 10 5712002 to 5712009 7 - TSS region transcription start site region 96559
Gm40595 10 5721485 to 5724198 2713 + protein coding gene predicted gene, 40595
Gm47679 10 5735819 to 5736938 1119 + pseudogene predicted gene, 47679