Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:43686782-44116845

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm47927 10 43681001 to 43687302 6301 - lincRNA gene predicted gene, 47927
Gm47926 10 43690726 to 43691828 1102 - lincRNA gene predicted gene, 47926
Tssr93151 10 43695450 to 43695469 19 + TSS region transcription start site region 93151
Tssr93152 10 43719632 to 43719634 2 + TSS region transcription start site region 93152
Cpgi1505 10 43723518 to 43723770 252 CpG island CpG island 1505
Gm40634 10 43741309 to 43743064 1755 - lincRNA gene predicted gene, 40634
1700027J07Rik 10 43746158 to 43765836 19678 + lincRNA gene RIKEN cDNA 1700027J07 gene
Tssr93153 10 43746540 to 43746556 16 + TSS region transcription start site region 93153
D10Mit55 10 43783590 to 43783690 100 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 55
Gm40635 10 43792585 to 43801108 8523 - lncRNA gene predicted gene, 40635
Gm9034 10 43821231 to 43822235 1004 + pseudogene predicted pseudogene 9034
Tssr93154 10 43825887 to 43825918 31 + TSS region transcription start site region 93154
4933404K13Rik 10 43825907 to 43833301 7394 + lincRNA gene RIKEN cDNA 4933404K13 gene
Tssr93155 10 43828786 to 43828790 4 + TSS region transcription start site region 93155
Tssr97475 10 43829194 to 43829197 3 - TSS region transcription start site region 97475
Tssr97476 10 43829200 to 43829215 15 - TSS region transcription start site region 97476
Qrsl1 10 43874188 to 43901739 27551 - protein coding gene glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1
Cpgi1506 10 43901292 to 43901932 640 CpG island CpG island 1506
Tssr97477 10 43901670 to 43901702 32 - TSS region transcription start site region 97477
Tssr97478 10 43901712 to 43901752 40 - TSS region transcription start site region 97478
Rtn4ip1 10 43901714 to 43947864 46150 + protein coding gene reticulon 4 interacting protein 1
Tssr93156 10 43901782 to 43901845 63 + TSS region transcription start site region 93156
Tssr93157 10 43901855 to 43901867 12 + TSS region transcription start site region 93157
Tssr93158 10 43902231 to 43902237 6 + TSS region transcription start site region 93158
Tssr93159 10 43927961 to 43927970 9 + TSS region transcription start site region 93159
Tssr93160 10 43947874 to 43947900 26 + TSS region transcription start site region 93160
Crybg1 10 43950636 to 44148853 198217 - protein coding gene crystallin beta-gamma domain containing 1
Gm40636 10 43968684 to 43985318 16634 + lncRNA gene predicted gene, 40636
Tssr97479 10 43971917 to 43971928 11 - TSS region transcription start site region 97479
Tssr97480 10 43971959 to 43971970 11 - TSS region transcription start site region 97480
Tssr97481 10 43972013 to 43972036 23 - TSS region transcription start site region 97481
Tssr97482 10 43980280 to 43980313 33 - TSS region transcription start site region 97482
Tssr97483 10 43996337 to 43996362 25 - TSS region transcription start site region 97483
Tssr97484 10 43997315 to 43997320 5 - TSS region transcription start site region 97484
Tssr97485 10 43997343 to 43997361 18 - TSS region transcription start site region 97485
Tssr97486 10 43997364 to 43997375 11 - TSS region transcription start site region 97486
Tssr97487 10 43997379 to 43997390 11 - TSS region transcription start site region 97487
Tssr97488 10 43997427 to 43997442 15 - TSS region transcription start site region 97488
Wght8 10 44000000 to 5000000 -39000000 QTL weight 8
Cpgi1507 10 44003378 to 44004721 1343 CpG island CpG island 1507
Tssr97489 10 44003576 to 44003587 11 - TSS region transcription start site region 97489
Tssr97490 10 44003590 to 44003644 54 - TSS region transcription start site region 97490
Tssr97491 10 44003813 to 44003818 5 - TSS region transcription start site region 97491
Tssr97492 10 44003832 to 44003898 66 - TSS region transcription start site region 97492
Gm10812 10 44004154 to 44004701 547 + pseudogene predicted gene 10812
Tssr97493 10 44004311 to 44004325 14 - TSS region transcription start site region 97493
Tssr97494 10 44004357 to 44004385 28 - TSS region transcription start site region 97494
Tssr97495 10 44004429 to 44004443 14 - TSS region transcription start site region 97495
Tssr97496 10 44004462 to 44004479 17 - TSS region transcription start site region 97496
Tssr97497 10 44004498 to 44004510 12 - TSS region transcription start site region 97497
Cpgi1508 10 44005677 to 44006119 442 CpG island CpG island 1508
Tssr93161 10 44016142 to 44016148 6 + TSS region transcription start site region 93161
Tssr97498 10 44022268 to 44022280 12 - TSS region transcription start site region 97498
Tssr97499 10 44022282 to 44022291 9 - TSS region transcription start site region 97499
Tssr3189 10 44058861 to 44058883 22 - TSS region transcription start site region 3189
Tssr97500 10 44058910 to 44058922 12 - TSS region transcription start site region 97500
D10Jpk3 10 44077431 to 44077562 131 DNA segment DNA segment, Chr 10, Japan, Kominami 3
Tssr97501 10 44099353 to 44099358 5 - TSS region transcription start site region 97501