Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:42700412-43180444

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ostm1 10 42678916 to 42702462 23546 + protein coding gene osteopetrosis associated transmembrane protein 1
Tssr93102 10 42700726 to 42700729 3 + TSS region transcription start site region 93102
D10Mit108 10 42733710 to 42733851 141 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 108
Gm15199 10 42740539 to 42758660 18121 - antisense lncRNA gene predicted gene 15199
Cpgi1494 10 42761176 to 42762487 1311 CpG island CpG island 1494
Tssr93103 10 42761483 to 42761490 7 + TSS region transcription start site region 93103
Sec63 10 42761496 to 42832514 71018 + protein coding gene SEC63-like (S. cerevisiae)
Tssr93104 10 42761540 to 42761607 67 + TSS region transcription start site region 93104
Gm26860 10 42761596 to 42763635 2039 - lincRNA gene predicted gene, 26860
Tssr93105 10 42761609 to 42761663 54 + TSS region transcription start site region 93105
Tssr97452 10 42762340 to 42762351 11 - TSS region transcription start site region 97452
Tssr93106 10 42767103 to 42767113 10 + TSS region transcription start site region 93106
Tssr97453 10 42768232 to 42768233 1 - TSS region transcription start site region 97453
Tssr93107 10 42782530 to 42782546 16 + TSS region transcription start site region 93107
Tssr93108 10 42806612 to 42806641 29 + TSS region transcription start site region 93108
Tssr93109 10 42812431 to 42812460 29 + TSS region transcription start site region 93109
Gm26464 10 42820463 to 42820767 304 - ribozyme gene predicted gene, 26464
Tssr93110 10 42827851 to 42827864 13 + TSS region transcription start site region 93110
Tssr93111 10 42827873 to 42827885 12 + TSS region transcription start site region 93111
4921519G19Rik 10 42854867 to 42856682 1815 unclassified gene RIKEN cDNA 4921519G19 gene
Gm33916 10 42856411 to 42858897 2486 + lncRNA gene predicted gene, 33916
Tssr93112 10 42860348 to 42860377 29 + TSS region transcription start site region 93112
Scml4 10 42860370 to 42960780 100410 + protein coding gene Scm polycomb group protein like 4
Tssr93113 10 42860624 to 42860627 3 + TSS region transcription start site region 93113
Tssr93114 10 42860648 to 42860676 28 + TSS region transcription start site region 93114
Tssr93115 10 42860682 to 42860692 10 + TSS region transcription start site region 93115
Tssr93116 10 42860695 to 42860714 19 + TSS region transcription start site region 93116
Tssr93117 10 42860741 to 42860746 5 + TSS region transcription start site region 93117
Tssr93118 10 42860748 to 42860759 11 + TSS region transcription start site region 93118
Tssr93119 10 42860776 to 42860810 34 + TSS region transcription start site region 93119
Gm34006 10 42861382 to 42864699 3317 - antisense lncRNA gene predicted gene, 34006
Tssr93120 10 42861578 to 42861588 10 + TSS region transcription start site region 93120
Tssr97454 10 42863997 to 42864000 3 - TSS region transcription start site region 97454
Cpgi1495 10 42864101 to 42864457 356 CpG island CpG island 1495
Tssr97455 10 42864221 to 42864240 19 - TSS region transcription start site region 97455
Gm48671 10 42886705 to 42888797 2092 - lincRNA gene predicted gene, 48671
Gm48670 10 42886892 to 42887465 573 + pseudogene predicted gene, 48670
Tssr97456 10 42888459 to 42888471 12 - TSS region transcription start site region 97456
Tssr97457 10 42888474 to 42888486 12 - TSS region transcription start site region 97457
Tssr93121 10 42897867 to 42897888 21 + TSS region transcription start site region 93121
Tssr93122 10 42897919 to 42897931 12 + TSS region transcription start site region 93122
Tssr93123 10 42901620 to 42901637 17 + TSS region transcription start site region 93123
Tssr93124 10 42901650 to 42901669 19 + TSS region transcription start site region 93124
Cpgi1496 10 42930305 to 42930620 315 CpG island CpG island 1496
Tssr93125 10 42934910 to 42934917 7 + TSS region transcription start site region 93125
Tssr93126 10 42940412 to 42940444 32 + TSS region transcription start site region 93126
Tssr93127 10 42940454 to 42940484 30 + TSS region transcription start site region 93127
Gm5079 10 42975770 to 42986086 10316 - lncRNA gene predicted gene 5079
Tssr97458 10 42999148 to 42999161 13 - TSS region transcription start site region 97458
Sobp 10 43002500 to 43174530 172030 - protein coding gene sine oculis binding protein
Tssr97459 10 43002691 to 43002715 24 - TSS region transcription start site region 97459
Cpgi1497 10 43020842 to 43022670 1828 CpG island CpG island 1497
Gm47815 10 43034993 to 43050219 15226 + antisense lncRNA gene predicted gene, 47815
Tssr97460 10 43108854 to 43108858 4 - TSS region transcription start site region 97460
Gm29245 10 43154216 to 43155631 1415 + antisense lncRNA gene predicted gene 29245
Cpgi1498 10 43173072 to 43175664 2592 CpG island CpG island 1498
Gm29246 10 43173263 to 43173958 695 + antisense lncRNA gene predicted gene 29246
Tssr97461 10 43174453 to 43174476 23 - TSS region transcription start site region 97461
Tssr97462 10 43174496 to 43174516 20 - TSS region transcription start site region 97462
Tssr97463 10 43174521 to 43174569 48 - TSS region transcription start site region 97463
Tssr97464 10 43174577 to 43174580 3 - TSS region transcription start site region 97464
Tssr97465 10 43174589 to 43174615 26 - TSS region transcription start site region 97465
9030612E09Rik 10 43174704 to 43176562 1858 + unclassified gene RIKEN cDNA 9030612E09 gene