MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 10:40208246-40262036

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm37786	10	40219583 to 40222807	3224	-	unclassified gene	predicted gene, 37786
Rpf2	10	40223246 to 40247036	23790	-	protein coding gene	ribosome production factor 2 homolog
Tssr97376	10	40227816 to 40227824	8	-	TSS region	transcription start site region 97376
Tssr97377	10	40227835 to 40227848	13	-	TSS region	transcription start site region 97377
Tssr97378	10	40233370 to 40233383	13	-	TSS region	transcription start site region 97378
Tssr97379	10	40234893 to 40234896	3	-	TSS region	transcription start site region 97379
Cpgi1454	10	40246625 to 40247273	648		CpG island	CpG island 1454
Tssr97380	10	40246991 to 40247045	54	-	TSS region	transcription start site region 97380
Tssr97381	10	40247117 to 40247135	18	-	TSS region	transcription start site region 97381
Gtf3c6	10	40247701 to 40257856	10155	-	protein coding gene	general transcription factor IIIC, polypeptide 6, alpha
Cpgi1455	10	40257388 to 40257950	562		CpG island	CpG island 1455
Tssr97382	10	40257648 to 40257687	39	-	TSS region	transcription start site region 97382
Tssr93011	10	40257708 to 40257735	27	+	TSS region	transcription start site region 93011
Tssr97383	10	40258082 to 40258092	10	-	TSS region	transcription start site region 97383
Tssr97384	10	40258112 to 40258132	20	-	TSS region	transcription start site region 97384
Tssr93012	10	40258463 to 40258470	7	+	TSS region	transcription start site region 93012
Rnu3a	10	40258576 to 40258679	103	+	snRNA gene	U3A small nuclear RNA
A930033M14Rik	10	40260934 to 40261333	399	+	lincRNA gene	RIKEN cDNA A930033M14 gene