Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:33939302-34149317

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zup1 10 33919142 to 33951269 32127 - protein coding gene zinc finger containing ubiquitin peptidase 1
Tssr97242 10 33939883 to 33939899 16 - TSS region transcription start site region 97242
Tssr97243 10 33947808 to 33947813 5 - TSS region transcription start site region 97243
Tssr97244 10 33949489 to 33949502 13 - TSS region transcription start site region 97244
Cpgi1429 10 33950835 to 33951333 498 CpG island CpG island 1429
Tssr97245 10 33951190 to 33951263 73 - TSS region transcription start site region 97245
Gm48018 10 33969983 to 33976689 6706 + pseudogene predicted gene, 48018
Gm7940 10 33972801 to 33973569 768 - pseudogene predicted gene 7940
Gm48034 10 33980497 to 33980840 343 - pseudogene predicted gene, 48034
A830082N09Rik 10 33987216 to 33995055 7839 - lncRNA gene RIKEN cDNA A830082N09 gene
Rwdd1 10 33996555 to 34019616 23061 - protein coding gene RWD domain containing 1
Gm48045 10 34018815 to 34020762 1947 + antisense lncRNA gene predicted gene, 48045
Cpgi1430 10 34019007 to 34020105 1098 CpG island CpG island 1430
Tssr3174 10 34019390 to 34019401 11 - TSS region transcription start site region 3174
Tssr97246 10 34019469 to 34019478 9 - TSS region transcription start site region 97246
Tssr97247 10 34019497 to 34019559 62 - TSS region transcription start site region 97247
Tssr97248 10 34019561 to 34019626 65 - TSS region transcription start site region 97248
Tssr97249 10 34019628 to 34019638 10 - TSS region transcription start site region 97249
Cpgi1431 10 34033922 to 34034259 337 CpG island CpG island 1431
Trappc3l 10 34037597 to 34109815 72218 + protein coding gene trafficking protein particle complex 3 like
Calhm4 10 34038784 to 34044310 5526 - protein coding gene calcium homeostasis modulator family member 4
Tssr97250 10 34044278 to 34044283 5 - TSS region transcription start site region 97250
Tssr97251 10 34044294 to 34044299 5 - TSS region transcription start site region 97251
Tssr97252 10 34044302 to 34044317 15 - TSS region transcription start site region 97252
D10Mit192 10 34066356 to 34066477 121 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 192
Calhm5 10 34091352 to 34096519 5167 - protein coding gene calcium homeostasis modulator family member 5
Tssr97253 10 34096375 to 34096389 14 - TSS region transcription start site region 97253
Tssr97254 10 34096464 to 34096467 3 - TSS region transcription start site region 97254
Tssr97255 10 34096480 to 34096497 17 - TSS region transcription start site region 97255
Tssr97256 10 34096507 to 34096554 47 - TSS region transcription start site region 97256
Calhm6 10 34126067 to 34127972 1905 - protein coding gene calcium homeostasis modulator family member 6
Cpgi1432 10 34127324 to 34127994 670 CpG island CpG island 1432
Tssr97257 10 34127919 to 34127930 11 - TSS region transcription start site region 97257
Tssr97258 10 34127955 to 34127980 25 - TSS region transcription start site region 97258
Tssr97259 10 34127997 to 34128014 17 - TSS region transcription start site region 97259