MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 10:123264092-124004095

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Recrq11	10	114500000 to 123800000	9300000		QTL	recombination rate in male meiosis QTL 11
Tafa2	10	123264002 to 123741204	477202	+	protein coding gene	TAFA chemokine like family member 2
Tssr96079	10	123264108 to 123264125	17	+	TSS region	transcription start site region 96079
Cpgi2313	10	123264421 to 123265884	1463		CpG island	CpG island 2313
Tssr99669	10	123264684 to 123264712	28	-	TSS region	transcription start site region 99669
Tssr3389	10	123264975 to 123265001	26	+	TSS region	transcription start site region 3389
Tssr96080	10	123265031 to 123265053	22	+	TSS region	transcription start site region 96080
Tssr96081	10	123360180 to 123360192	12	+	TSS region	transcription start site region 96081
Tssr96082	10	123360766 to 123360805	39	+	TSS region	transcription start site region 96082
Tssr96083	10	123432565 to 123432570	5	+	TSS region	transcription start site region 96083
Gm22958	10	123432566 to 123432749	183	+	snRNA gene	predicted gene, 22958
Tssr96084	10	123434712 to 123434722	10	+	TSS region	transcription start site region 96084
Gm47801	10	123437500 to 123440600	3100	+	unclassified gene	predicted gene, 47801
Gm40794	10	123533857 to 123537534	3677	-	lncRNA gene	predicted gene, 40794
Tssr3390	10	123582560 to 123582563	3	+	TSS region	transcription start site region 3390
Gm19169	10	123583574 to 123584814	1240	+	pseudogene	predicted gene, 19169
Tssr96085	10	123634092 to 123634095	3	+	TSS region	transcription start site region 96085
Gm18510	10	123890803 to 123891898	1095	-	pseudogene	predicted gene, 18510