Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:117331038-117731045

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr99436 10 117339747 to 117339750 3 - TSS region transcription start site region 99436
Cpsf6 10 117344667 to 117376990 32323 - protein coding gene cleavage and polyadenylation specific factor 6
Tssr99437 10 117348241 to 117348246 5 - TSS region transcription start site region 99437
Tssr99438 10 117350882 to 117350887 5 - TSS region transcription start site region 99438
Tssr99439 10 117357115 to 117357118 3 - TSS region transcription start site region 99439
Tssr99440 10 117360961 to 117360972 11 - TSS region transcription start site region 99440
Tssr99441 10 117361046 to 117361063 17 - TSS region transcription start site region 99441
Tssr3365 10 117361076 to 117361115 39 - TSS region transcription start site region 3365
Tssr99442 10 117361177 to 117361188 11 - TSS region transcription start site region 99442
Cpgi2229 10 117375778 to 117377275 1497 CpG island CpG island 2229
Tssr99443 10 117376906 to 117376917 11 - TSS region transcription start site region 99443
Tssr99444 10 117376922 to 117376954 32 - TSS region transcription start site region 99444
Tssr99445 10 117376955 to 117376978 23 - TSS region transcription start site region 99445
Tssr99446 10 117380038 to 117380051 13 - TSS region transcription start site region 99446
Cpgi2230 10 117389792 to 117390219 427 CpG island CpG island 2230
Gm48903 10 117390022 to 117398587 8565 + lincRNA gene predicted gene, 48903
Gm40770 10 117408872 to 117413904 5032 - lincRNA gene predicted gene, 40770
Tssr99447 10 117411244 to 117411265 21 - TSS region transcription start site region 99447
Tssr99448 10 117413906 to 117413917 11 - TSS region transcription start site region 99448
Cpgi2231 10 117418734 to 117419080 346 CpG island CpG island 2231
Gm9002 10 117429618 to 117430116 498 + pseudogene predicted gene 9002
Cpgi2232 10 117435345 to 117435789 444 CpG island CpG island 2232
Gm32141 10 117446017 to 117447487 1470 - lincRNA gene predicted gene, 32141
Tssr95918 10 117531038 to 117531045 7 + TSS region transcription start site region 95918
Gm32235 10 117559133 to 117560228 1095 + lincRNA gene predicted gene, 32235
Gm9004 10 117588117 to 117588872 755 - pseudogene predicted gene 9004
Cpgi2233 10 117594057 to 117594318 261 CpG island CpG island 2233
Kifc5c-ps 10 117594353 to 117595882 1529 + pseudogene kinesin family member C5C, pseudogene
Gm32319 10 117604027 to 117608259 4232 - lncRNA gene predicted gene, 32319
Cpgi2234 10 117608228 to 117608514 286 CpG island CpG island 2234
Gm32365 10 117614574 to 117616661 2087 + lincRNA gene predicted gene, 32365
Cpgi2235 10 117628869 to 117630026 1157 CpG island CpG island 2235
Tssr95919 10 117629493 to 117629506 13 + TSS region transcription start site region 95919
Cpm 10 117629500 to 117687352 57852 + protein coding gene carboxypeptidase M
Cpgi2236 10 117639985 to 117640201 216 CpG island CpG island 2236
Gm25709 10 117662282 to 117662388 106 - snRNA gene predicted gene, 25709
Mdm2 10 117688875 to 117710758 21883 - protein coding gene transformed mouse 3T3 cell double minute 2
Tssr99449 10 117689865 to 117689880 15 - TSS region transcription start site region 99449
Tssr99450 10 117689881 to 117689901 20 - TSS region transcription start site region 99450
Tssr99451 10 117690221 to 117690232 11 - TSS region transcription start site region 99451
Tssr99452 10 117690427 to 117690439 12 - TSS region transcription start site region 99452
Tssr99453 10 117690499 to 117690517 18 - TSS region transcription start site region 99453
Tssr99454 10 117690535 to 117690555 20 - TSS region transcription start site region 99454
Tssr99455 10 117693135 to 117693144 9 - TSS region transcription start site region 99455
Tssr99456 10 117693158 to 117693177 19 - TSS region transcription start site region 99456
Tssr99457 10 117693274 to 117693281 7 - TSS region transcription start site region 99457
Tssr95920 10 117693761 to 117693774 13 + TSS region transcription start site region 95920
Tssr99458 10 117695417 to 117695445 28 - TSS region transcription start site region 99458
Tssr99459 10 117699035 to 117699041 6 - TSS region transcription start site region 99459
Tssr99460 10 117701616 to 117701625 9 - TSS region transcription start site region 99460
Cpgi2237 10 117709852 to 117711108 1256 CpG island CpG island 2237
Tssr99461 10 117710015 to 117710032 17 - TSS region transcription start site region 99461
Tssr99462 10 117710073 to 117710087 14 - TSS region transcription start site region 99462
Tssr95921 10 117710074 to 117710085 11 + TSS region transcription start site region 95921
Tssr99463 10 117710088 to 117710099 11 - TSS region transcription start site region 99463
Tssr99464 10 117710103 to 117710128 25 - TSS region transcription start site region 99464
Tssr95922 10 117710153 to 117710192 39 + TSS region transcription start site region 95922
Tssr99465 10 117710193 to 117710205 12 - TSS region transcription start site region 99465
Tssr99466 10 117710228 to 117710303 75 - TSS region transcription start site region 99466
Tssr99467 10 117710644 to 117710661 17 - TSS region transcription start site region 99467
Tssr99468 10 117710674 to 117710736 62 - TSS region transcription start site region 99468
Tssr99469 10 117710745 to 117710773 28 - TSS region transcription start site region 99469
Tssr95923 10 117710887 to 117710947 60 + TSS region transcription start site region 95923
Tssr95924 10 117711714 to 117711756 42 + TSS region transcription start site region 95924
Tssr99470 10 117715238 to 117715258 20 - TSS region transcription start site region 99470
Tssr95925 10 117717900 to 117717949 49 + TSS region transcription start site region 95925
Tssr95926 10 117719221 to 117719237 16 + TSS region transcription start site region 95926
Tssr95927 10 117719338 to 117719342 4 + TSS region transcription start site region 95927
Tssr95928 10 117721712 to 117721733 21 + TSS region transcription start site region 95928