Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:109424012-110384022

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm40757 10 109597698 to 109642136 44438 + lncRNA gene predicted gene, 40757
Tssr99231 10 109638849 to 109638853 4 - TSS region transcription start site region 99231
Tssr3348 10 109642451 to 109642456 5 + TSS region transcription start site region 3348
3110043J17Rik 10 109648779 to 109649538 759 + unclassified gene RIKEN cDNA 3110043J17 gene
Nav3 10 109681573 to 110455897 774324 - protein coding gene neuron navigator 3
Cpgi2180 10 109684502 to 109684658 156 CpG island CpG island 2180
Cpgi2181 10 109767120 to 109767306 186 CpG island CpG island 2181
Tssr99232 10 109780080 to 109780083 3 - TSS region transcription start site region 99232
Tssr99233 10 109790172 to 109790185 13 - TSS region transcription start site region 99233
Tssr99234 10 109833195 to 109833220 25 - TSS region transcription start site region 99234
Tssr99235 10 109883738 to 109883782 44 - TSS region transcription start site region 99235
Tssr99236 10 109903814 to 109903829 15 - TSS region transcription start site region 99236
Tssr99237 10 109903830 to 109903845 15 - TSS region transcription start site region 99237
Tssr99238 10 109903852 to 109903871 19 - TSS region transcription start site region 99238
Tssr99239 10 109903875 to 109903900 25 - TSS region transcription start site region 99239
Tssr99240 10 109903911 to 109903927 16 - TSS region transcription start site region 99240
Tssr99241 10 109903952 to 109903966 14 - TSS region transcription start site region 99241
Tssr99242 10 109904012 to 109904022 10 - TSS region transcription start site region 99242
Tssr99243 10 109986532 to 109986581 49 - TSS region transcription start site region 99243
Tssr99244 10 110000902 to 110000913 11 - TSS region transcription start site region 99244
Tssr99245 10 110000934 to 110000943 9 - TSS region transcription start site region 99245
Gm3871 10 110003891 to 110013355 9464 unclassified gene predicted gene 3871
Gm36935 10 110037488 to 110037779 291 - unclassified gene predicted gene, 36935
Gm47337 10 110078691 to 110080967 2276 + unclassified gene predicted gene, 47337
Tssr99246 10 110084540 to 110084545 5 - TSS region transcription start site region 99246
Tssr99247 10 110098315 to 110098327 12 - TSS region transcription start site region 99247
Gm47339 10 110099819 to 110102904 3085 + unclassified gene predicted gene, 47339
Tssr99248 10 110126889 to 110126895 6 - TSS region transcription start site region 99248
Gm47340 10 110139739 to 110140169 430 - pseudogene predicted gene, 47340
A830061P03Rik 10 110140706 to 110144178 3472 unclassified gene RIKEN cDNA A830061P03 gene
Tssr99249 10 110149585 to 110149615 30 - TSS region transcription start site region 99249
Tssr99250 10 110152268 to 110152273 5 - TSS region transcription start site region 99250
Tssr99251 10 110337101 to 110337104 3 - TSS region transcription start site region 99251
Cpgi2182 10 110347983 to 110348141 158 CpG island CpG island 2182
Gm47338 10 110379508 to 110381661 2153 + unclassified gene predicted gene, 47338