Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:92849803-92912906

31 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gpc1	1	92831686 to 92860211	28525	+	protein coding gene	glypican 1
Mir149	1	92850378 to 92850443	65	+	miRNA gene	microRNA 149
Tssr8134	1	92855966 to 92855985	19	+	TSS region	transcription start site region 8134
Tssr8135	1	92858553 to 92858576	23	+	TSS region	transcription start site region 8135
Tssr8136	1	92859692 to 92859703	11	+	TSS region	transcription start site region 8136
Tssr8137	1	92859835 to 92859839	4	+	TSS region	transcription start site region 8137
Ankmy1	1	92860361 to 92902987	42626	-	protein coding gene	ankyrin repeat and MYND domain containing 1
Gm36184	1	92864579 to 92875711	11132	+	lncRNA gene	predicted gene, 36184
Tssr8138	1	92865178 to 92865210	32	+	TSS region	transcription start site region 8138
Cpgi587	1	92879262 to 92879419	157		CpG island	CpG island 587
Tssr12981	1	92880218 to 92880231	13	-	TSS region	transcription start site region 12981
Tssr8139	1	92894898 to 92894901	3	+	TSS region	transcription start site region 8139
D1Mit371.1a	1	92898556 to 92898667	111		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 371.1a
Tssr12982	1	92902869 to 92902875	6	-	TSS region	transcription start site region 12982
Tssr12983	1	92902883 to 92902921	38	-	TSS region	transcription start site region 12983
Cpgi588	1	92902903 to 92903314	411		CpG island	CpG island 588
Cpgi589	1	92906760 to 92907746	986		CpG island	CpG island 589
Tssr12984	1	92906860 to 92906887	27	-	TSS region	transcription start site region 12984
Tssr8140	1	92906959 to 92907036	77	+	TSS region	transcription start site region 8140
Dusp28	1	92906981 to 92908435	1454	+	protein coding gene	dual specificity phosphatase 28
Tssr12985	1	92908119 to 92908130	11	-	TSS region	transcription start site region 12985
5033417F24Rik	1	92908378 to 92910689	2311	-	antisense lncRNA gene	RIKEN cDNA 5033417F24 gene
Cpgi590	1	92910408 to 92911960	1552		CpG island	CpG island 590
Tssr8141	1	92910612 to 92910637	25	+	TSS region	transcription start site region 8141
Tssr8142	1	92910640 to 92910665	25	+	TSS region	transcription start site region 8142
Tssr8143	1	92910758 to 92910769	11	+	TSS region	transcription start site region 8143
Rnpepl1	1	92910803 to 92920585	9782	+	protein coding gene	arginyl aminopeptidase (aminopeptidase B)-like 1
Tssr8144	1	92910805 to 92910834	29	+	TSS region	transcription start site region 8144
Tssr8145	1	92910901 to 92910912	11	+	TSS region	transcription start site region 8145
Tssr8146	1	92911016 to 92911027	11	+	TSS region	transcription start site region 8146
Tssr8147	1	92912045 to 92912063	18	+	TSS region	transcription start site region 8147