Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:37790477-37998338

44 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tsga10	1	37754776 to 37866429	111653	-	protein coding gene	testis specific 10
Cpgi167	1	37864480 to 37865628	1148		CpG island	CpG island 167
Tssr11316	1	37864801 to 37864813	12	-	TSS region	transcription start site region 11316
Tssr11317	1	37865040 to 37865116	76	-	TSS region	transcription start site region 11317
Tssr11318	1	37865128 to 37865139	11	-	TSS region	transcription start site region 11318
Gm26805	1	37865299 to 37871388	6089	+	antisense lncRNA gene	predicted gene, 26805
Lipt1	1	37871738 to 37876228	4490	+	protein coding gene	lipoyltransferase 1
Tssr6323	1	37872208 to 37872233	25	+	TSS region	transcription start site region 6323
Cpgi168	1	37872271 to 37872621	350		CpG island	CpG island 168
Tssr6324	1	37872333 to 37872371	38	+	TSS region	transcription start site region 6324
Cpgi169	1	37875259 to 37875842	583		CpG island	CpG island 169
Mitd1	1	37878888 to 37890442	11554	-	protein coding gene	MIT, microtubule interacting and transport, domain containing 1
Tssr6325	1	37886360 to 37886364	4	+	TSS region	transcription start site region 6325
Cpgi170	1	37890086 to 37890787	701		CpG island	CpG island 170
Tssr11319	1	37890310 to 37890324	14	-	TSS region	transcription start site region 11319
Tssr11320	1	37890333 to 37890416	83	-	TSS region	transcription start site region 11320
Mrpl30	1	37890471 to 37898338	7867	+	protein coding gene	mitochondrial ribosomal protein L30
Tssr6326	1	37890519 to 37890542	23	+	TSS region	transcription start site region 6326
Tssr6327	1	37897850 to 37897853	3	+	TSS region	transcription start site region 6327
Lyg2	1	37905923 to 37916493	10570	-	protein coding gene	lysozyme G-like 2
Tssr11321	1	37916412 to 37916426	14	-	TSS region	transcription start site region 11321
Tssr11322	1	37916485 to 37916499	14	-	TSS region	transcription start site region 11322
Gm15457	1	37933596 to 37954136	20540	+	antisense lncRNA gene	predicted gene 15457
Lyg1	1	37946738 to 37957759	11021	-	protein coding gene	lysozyme G-like 1
Tssr11323	1	37957757 to 37957760	3	-	TSS region	transcription start site region 11323
D1Mit518	1	37966284 to 37966435	151		DNA segment	DNA Segment, Chr 1, Massachusetts Institute of Technology-518
Gm23409	1	37973967 to 37974203	236	+	unclassified non-coding RNA gene	predicted gene, 23409
Txndc9	1	37985189 to 37997893	12704	-	protein coding gene	thioredoxin domain containing 9
Cpgi171	1	37996845 to 37997498	653		CpG island	CpG island 171
Tssr11324	1	37996919 to 37996950	31	-	TSS region	transcription start site region 11324
Tssr11325	1	37996961 to 37996976	15	-	TSS region	transcription start site region 11325
Tssr11326	1	37997219 to 37997280	61	-	TSS region	transcription start site region 11326
Cpgi172	1	37997809 to 37998727	918		CpG island	CpG island 172
Tssr6328	1	37997956 to 37997963	7	+	TSS region	transcription start site region 6328
Tssr6329	1	37997975 to 37997986	11	+	TSS region	transcription start site region 6329
Tssr49	1	37997987 to 37997994	7	+	TSS region	transcription start site region 49
Tssr6330	1	37998005 to 37998014	9	+	TSS region	transcription start site region 6330
Eif5b	1	37998010 to 38055579	57569	+	protein coding gene	eukaryotic translation initiation factor 5B
Tssr6331	1	37998097 to 37998114	17	+	TSS region	transcription start site region 6331
Tssr6332	1	37998115 to 37998149	34	+	TSS region	transcription start site region 6332
Tssr6333	1	37998152 to 37998165	13	+	TSS region	transcription start site region 6333
Tssr50	1	37998187 to 37998199	12	+	TSS region	transcription start site region 50
Tssr51	1	37998255 to 37998273	18	+	TSS region	transcription start site region 51
Tssr52	1	37998294 to 37998297	3	+	TSS region	transcription start site region 52