Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:178901960-179568041

34 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Kif26b	1	178529125 to 178939200	410075	+	protein coding gene	kinesin family member 26B
Gm16564	1	178898582 to 178917614	19032	-	antisense lncRNA gene	predicted gene 16564
Cpgi1094	1	178917298 to 178918101	803		CpG island	CpG island 1094
A730054J21Rik	1	178935043 to 178939199	4156		unclassified gene	RIKEN cDNA A730054J21 gene
D1Mit315	1	178940049 to 178940193	144		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 315
Smyd3	1	178955031 to 179518053	563022	-	protein coding gene	SET and MYND domain containing 3
Tssr15495	1	178989350 to 178989360	10	-	TSS region	transcription start site region 15495
Tssr15496	1	179139419 to 179139423	4	-	TSS region	transcription start site region 15496
Tssr15497	1	179156264 to 179156307	43	-	TSS region	transcription start site region 15497
Tssr10416	1	179174449 to 179174478	29	+	TSS region	transcription start site region 10416
A130004G11Rik	1	179237130 to 179240753	3623		unclassified gene	RIKEN cDNA A130004G11 gene
Gm46250	1	179307543 to 179320650	13107	-	lncRNA gene	predicted gene, 46250
Gm31349	1	179324935 to 179328064	3129	-	lncRNA gene	predicted gene, 31349
Tssr15498	1	179381703 to 179381717	14	-	TSS region	transcription start site region 15498
D1Ertd704e	1	179400846 to 179401089	243		DNA segment	DNA segment, Chr 1, ERATO Doi 704, expressed
Tssr15499	1	179403882 to 179403886	4	-	TSS region	transcription start site region 15499
Tssr15500	1	179502114 to 179502118	4	-	TSS region	transcription start site region 15500
Cpgi1095	1	179517215 to 179518143	928		CpG island	CpG island 1095
Tssr15501	1	179517976 to 179517989	13	-	TSS region	transcription start site region 15501
Tssr15502	1	179517992 to 179518026	34	-	TSS region	transcription start site region 15502
Tssr15503	1	179518028 to 179518045	17	-	TSS region	transcription start site region 15503
Gm5561	1	179520378 to 179520857	479	-	pseudogene	predicted gene 5561
Tfb2m	1	179528055 to 179546267	18212	-	protein coding gene	transcription factor B2, mitochondrial
Gm15480	1	179538417 to 179538935	518	+	pseudogene	predicted gene 15480
Cpgi1096	1	179545680 to 179547007	1327		CpG island	CpG island 1096
Tssr15504	1	179546227 to 179546260	33	-	TSS region	transcription start site region 15504
Tssr15505	1	179546261 to 179546276	15	-	TSS region	transcription start site region 15505
Tssr10417	1	179546303 to 179546363	60	+	TSS region	transcription start site region 10417
Cnst	1	179546370 to 179627478	81108	+	protein coding gene	consortin, connexin sorting protein
Tssr10418	1	179546383 to 179546405	22	+	TSS region	transcription start site region 10418
Tssr10419	1	179546408 to 179546433	25	+	TSS region	transcription start site region 10419
Tssr10420	1	179546434 to 179546520	86	+	TSS region	transcription start site region 10420
Tssr10421	1	179546521 to 179546538	17	+	TSS region	transcription start site region 10421
Tssr10422	1	179549655 to 179549677	22	+	TSS region	transcription start site region 10422