Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:171508718-171635316

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm9765 1 171515233 to 171516922 1689 + pseudogene predicted gene 9765
Itln1 1 171518122 to 171535294 17172 - protein coding gene intelectin 1 (galactofuranose binding)
Tssr15046 1 171531131 to 171531148 17 - TSS region transcription start site region 15046
Tssr15047 1 171531660 to 171531688 28 - TSS region transcription start site region 15047
Tssr15048 1 171535284 to 171535300 16 - TSS region transcription start site region 15048
Gm37450 1 171541692 to 171541861 169 + pseudogene predicted gene, 37450
Gm35200 1 171553526 to 171557051 3525 - lncRNA gene predicted gene, 35200
Gm39703 1 171557872 to 171562126 4254 - lncRNA gene predicted gene, 39703
Cd244a 1 171558713 to 171585316 26603 + protein coding gene CD244 molecule A
Tssr10062 1 171558912 to 171558930 18 + TSS region transcription start site region 10062
Tssr10063 1 171559096 to 171559120 24 + TSS region transcription start site region 10063
Tssr10064 1 171559132 to 171559150 18 + TSS region transcription start site region 10064
Tssr10065 1 171559160 to 171559181 21 + TSS region transcription start site region 10065
Tssr10066 1 171559186 to 171559205 19 + TSS region transcription start site region 10066
Tssr10067 1 171559217 to 171559234 17 + TSS region transcription start site region 10067
Tssr10068 1 171559243 to 171559274 31 + TSS region transcription start site region 10068
Tssr10069 1 171559298 to 171559305 7 + TSS region transcription start site region 10069
Tssr15049 1 171562033 to 171562075 42 - TSS region transcription start site region 15049
Tssr10070 1 171580531 to 171580533 2 + TSS region transcription start site region 10070
Obq25 1 171582944 to 171582944 0 QTL obesity QTL 25
Ly9 1 171588624 to 171607410 18786 - protein coding gene lymphocyte antigen 9
Tssr15050 1 171601856 to 171601913 57 - TSS region transcription start site region 15050
Tssr15051 1 171602013 to 171602036 23 - TSS region transcription start site region 15051
Tssr15052 1 171605251 to 171605268 17 - TSS region transcription start site region 15052
Tssr15053 1 171607321 to 171607363 42 - TSS region transcription start site region 15053
Tssr15054 1 171607378 to 171607403 25 - TSS region transcription start site region 15054
Tssr10071 1 171607506 to 171607517 11 + TSS region transcription start site region 10071
Tssr15055 1 171616829 to 171616842 13 - TSS region transcription start site region 15055
Tssr10072 1 171619228 to 171619232 4 + TSS region transcription start site region 10072
Tssr10073 1 171628275 to 171628288 13 + TSS region transcription start site region 10073
Tssr15056 1 171630419 to 171630425 6 - TSS region transcription start site region 15056
Tssr10074 1 171630634 to 171630639 5 + TSS region transcription start site region 10074
Tssr15057 1 171632064 to 171632087 23 - TSS region transcription start site region 15057
Tssr15058 1 171632162 to 171632167 5 - TSS region transcription start site region 15058
Tssr15059 1 171632235 to 171632246 11 - TSS region transcription start site region 15059
Slamf7 1 171632403 to 171653035 20632 - protein coding gene SLAM family member 7
Tssr15060 1 171632779 to 171632798 19 - TSS region transcription start site region 15060
Tssr15061 1 171632845 to 171632856 11 - TSS region transcription start site region 15061
Tssr15062 1 171632869 to 171632879 10 - TSS region transcription start site region 15062
Tssr15063 1 171633164 to 171633180 16 - TSS region transcription start site region 15063
Tssr15064 1 171633312 to 171633331 19 - TSS region transcription start site region 15064
Tssr15065 1 171633900 to 171633905 5 - TSS region transcription start site region 15065
Tssr15066 1 171634074 to 171634084 10 - TSS region transcription start site region 15066
Tssr15067 1 171634108 to 171634119 11 - TSS region transcription start site region 15067
Tssr15068 1 171634127 to 171634141 14 - TSS region transcription start site region 15068
Tssr15069 1 171634157 to 171634164 7 - TSS region transcription start site region 15069
Tssr15070 1 171634202 to 171634218 16 - TSS region transcription start site region 15070
Tssr15071 1 171634285 to 171634311 26 - TSS region transcription start site region 15071
Tssr15072 1 171634322 to 171634343 21 - TSS region transcription start site region 15072
Tssr15073 1 171634444 to 171634455 11 - TSS region transcription start site region 15073
Tssr15074 1 171634491 to 171634509 18 - TSS region transcription start site region 15074
Tssr15075 1 171634547 to 171634558 11 - TSS region transcription start site region 15075
Tssr15076 1 171634566 to 171634589 23 - TSS region transcription start site region 15076
Tssr15077 1 171634625 to 171634638 13 - TSS region transcription start site region 15077
Tssr15078 1 171634642 to 171634653 11 - TSS region transcription start site region 15078
Tssr15079 1 171634715 to 171634732 17 - TSS region transcription start site region 15079
Tssr15080 1 171634739 to 171634764 25 - TSS region transcription start site region 15080
Tssr10075 1 171634757 to 171634769 12 + TSS region transcription start site region 10075
Tssr15081 1 171634793 to 171634823 30 - TSS region transcription start site region 15081
Tssr10076 1 171634871 to 171634906 35 + TSS region transcription start site region 10076
Gm37787 1 171634879 to 171636022 1143 + antisense lncRNA gene predicted gene, 37787
Tssr15082 1 171634914 to 171634932 18 - TSS region transcription start site region 15082
Tssr15083 1 171634943 to 171634961 18 - TSS region transcription start site region 15083
Tssr15084 1 171634965 to 171634976 11 - TSS region transcription start site region 15084
Tssr15085 1 171634979 to 171635001 22 - TSS region transcription start site region 15085