Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:166293610-166509853

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ildr2 1 166254139 to 166316823 62684 + protein coding gene immunoglobulin-like domain containing receptor 2
5330438I03Rik 1 166306741 to 166309585 2844 - antisense lncRNA gene RIKEN cDNA 5330438I03 gene
Cpgi967 1 166308559 to 166309688 1129 CpG island CpG island 967
Tssr9873 1 166339420 to 166339427 7 + TSS region transcription start site region 9873
Gm15853 1 166377878 to 166380493 2615 - antisense lncRNA gene predicted gene 15853
Cpgi968 1 166378649 to 166380177 1528 CpG island CpG island 968
Tada1 1 166379167 to 166393621 14454 + protein coding gene transcriptional adaptor 1
Tssr9874 1 166379272 to 166379357 85 + TSS region transcription start site region 9874
Tssr9875 1 166379361 to 166379407 46 + TSS region transcription start site region 9875
Tssr14818 1 166380105 to 166380131 26 - TSS region transcription start site region 14818
Pogk 1 166393610 to 166409850 16240 - protein coding gene pogo transposable element with KRAB domain
Cpgi969 1 166409105 to 166410166 1061 CpG island CpG island 969
Tssr14819 1 166409747 to 166409753 6 - TSS region transcription start site region 14819
Tssr14820 1 166409773 to 166409849 76 - TSS region transcription start site region 14820
Gm16418 1 166431705 to 166431875 170 - pseudogene predicted pseudogene 16418
Gm39694 1 166432678 to 166441856 9178 + lncRNA gene predicted gene, 39694
Gm33354 1 166448252 to 166449157 905 - lncRNA gene predicted gene, 33354
Tssr14821 1 166464903 to 166464930 27 - TSS region transcription start site region 14821
Tssr14822 1 166483458 to 166483473 15 - TSS region transcription start site region 14822
Gm4846 1 166483613 to 166497588 13975 - protein coding gene predicted gene 4846
Tssr14823 1 166503780 to 166503792 12 - TSS region transcription start site region 14823
Tssr14824 1 166503872 to 166503878 6 - TSS region transcription start site region 14824
Tssr14825 1 166506191 to 166506195 4 - TSS region transcription start site region 14825