Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:119552467-119937585

38 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Epb41l5	1	119545037 to 119649000	103963	-	protein coding gene	erythrocyte membrane protein band 4.1 like 5
Gm37219	1	119630744 to 119631669	925	-	unclassified gene	predicted gene, 37219
Tssr13214	1	119631667 to 119631668	1	-	TSS region	transcription start site region 13214
Tssr13215	1	119637442 to 119637446	4	-	TSS region	transcription start site region 13215
Cpgi658	1	119642496 to 119642682	186		CpG island	CpG island 658
D1Mit366	1	119645481 to 119645630	149		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 366
Cpgi659	1	119648238 to 119649229	991		CpG island	CpG island 659
Tssr8391	1	119648380 to 119648389	9	+	TSS region	transcription start site region 8391
Tssr13216	1	119648622 to 119648653	31	-	TSS region	transcription start site region 13216
Tssr13217	1	119648903 to 119648981	78	-	TSS region	transcription start site region 13217
Ptpn4	1	119652467 to 119837542	185075	-	protein coding gene	protein tyrosine phosphatase, non-receptor type 4
B230337E12Rik	1	119652468 to 119654875	2407		unclassified gene	RIKEN cDNA B230337E12 gene
Gm3851	1	119787769 to 119788086	317	+	pseudogene	predicted gene 3851
Gm37745	1	119790763 to 119798925	8162	-	unclassified gene	predicted gene, 37745
Gm29657	1	119793520 to 119794229	709	+	pseudogene	predicted gene 29657
Gm8338	1	119817763 to 119818125	362	+	pseudogene	predicted gene 8338
Tssr13218	1	119821312 to 119821316	4	-	TSS region	transcription start site region 13218
Tssr13219	1	119828087 to 119828092	5	-	TSS region	transcription start site region 13219
Cpgi660	1	119836769 to 119837897	1128		CpG island	CpG island 660
Tssr13220	1	119837088 to 119837139	51	-	TSS region	transcription start site region 13220
Tssr8392	1	119837170 to 119837177	7	+	TSS region	transcription start site region 8392
Tssr13221	1	119837288 to 119837299	11	-	TSS region	transcription start site region 13221
Tssr13222	1	119837319 to 119837328	9	-	TSS region	transcription start site region 13222
Tssr13223	1	119837338 to 119837386	48	-	TSS region	transcription start site region 13223
Tssr13224	1	119837466 to 119837555	89	-	TSS region	transcription start site region 13224
Tssr13225	1	119837667 to 119837673	6	-	TSS region	transcription start site region 13225
Gm29658	1	119874781 to 119875010	229	+	pseudogene	predicted gene 29658
Gm3551	1	119897461 to 119898124	663	+	pseudogene	predicted gene 3551
Tssr13226	1	119899853 to 119899870	17	-	TSS region	transcription start site region 13226
Gm28209	1	119903130 to 119906897	3767	+	lincRNA gene	predicted gene 28209
Tssr183	1	119906837 to 119906842	5	+	TSS region	transcription start site region 183
Tmem177	1	119907890 to 119913168	5278	-	protein coding gene	transmembrane protein 177
Cpgi661	1	119913070 to 119913436	366		CpG island	CpG island 661
Tssr13227	1	119913077 to 119913086	9	-	TSS region	transcription start site region 13227
Tssr13228	1	119913162 to 119913202	40	-	TSS region	transcription start site region 13228
D1Mit260	1	119919798 to 119919934	136		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 260
Cfap221	1	119923341 to 119997234	73893	-	protein coding gene	cilia and flagella associated protein 221
Tssr13229	1	119936300 to 119936338	38	-	TSS region	transcription start site region 13229