Levy1: Bone microarchitecture in 31 emerging lines of the Collaborative Cross (pre-CC) (2015)

Levy R, Mott RF, Iraqi FA, Gabet Y. Collaborative cross mice in a genetic association study reveal new candidate genes for bone microarchitecture. BMC Genomics. 2015 Nov 26;16(1):1013. doi: 10.1186/s12864-015-2213-x.   PubMed 26611327     FullText


       
Levy1 downloads
• Download Levy1 project data set     one row per animal, one column per trait
• Download Levy1 strain means, SD, N, etc.     one row per strain/sex/measure
Participants Roei Levy       Tel Aviv University Tel Aviv ISRAEL
Richard F Mott       University of Oxford Oxford UK
Fuad A Iraqi       Tel Aviv University Tel Aviv ISRAEL
Yankel Gabet       Tel Aviv University Tel Aviv ISRAEL
ContactRoei Levy     roei231@gmail.com
AcknowledgementsFunding provided by Tel Aviv University and by Israel Science Foundation (ISF) Grant No. 1822/12; Wellcome Trust grants 085906/Z/08/Z, 075491/Z/04, and 090532/Z/09/Z
Project type Phenotype strain survey data set
MPD identifiersLevy1     MPD:549
Data changelog No updates/corrections.       Initial release date: 06/2016.
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Summary of procedures that were conducted
• body weight
• computed tomography Bone microarchitecture, morphology (femur).
Mice: CC pre   31 strains   ♀♂   age 8-14wks   1 cohort

Data set MPD ID Procedure / Protocol Drug or Challenge Phenotype Measure Panel No. of Strains Sex Age Sample Size (Avg)
    Levy1 54902 body weight (none) body weight   [g]  bw CC pre 26 both 8-14wks N=3
    Levy1 54903 computed tomography (none) femur length   [mm]  femur_length CC pre 27 both 8-14wks N=3
    Levy1 54904 computed tomography (none) trabecular bone volume fraction of femur (BVTV)   [%]  Tb_volume CC pre 27 both 8-14wks N=3
    Levy1 54905 computed tomography (none) trabecular bone connectivity density of femur (Conn.D)   [mm-3]  Tb_connectivity CC pre 27 both 8-14wks N=3
    Levy1 54906 computed tomography (none) trabecular bone number of femur (Tb.N)   [mm-1]  Tb_number CC pre 27 both 8-14wks N=3
    Levy1 54907 computed tomography (none) trabecular bone thickness of femur (Tb.Th)   [µm]  Tb_thickness CC pre 27 both 8-14wks N=3
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