Procedure:   computed tomography          


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Data set MPD ID Procedure / Protocol Drug or Challenge Phenotype Measure Panel No. of Strains Sex Age Sample Size (Avg) Year
Beamer1 10501 computed tomography (none) femur, average bone volume (total, mid diaphysis)   [g/cm3]  femur_mid_cort_vol QTL population f 20wks N=711 1999
Beamer1 10502 computed tomography (none) femur, average cortical bone volume (mid-diaphysis)   [g/cm3]  femur_mid_tot_vol QTL population f 20wks N=711 1999
Beamer2 11206 computed tomography (none) femur, average bone volume (total, mid-diaphysis)   [g/cm3]  femur_mid_tot_vol QTL population f 16wks N=999 2001
Beamer2 11207 computed tomography (none) femur, average cortical bone volume (mid-diaphysis)   [g/cm3]  femur_mid_cort_vol QTL population f 16wks N=999 2001
Beamer2 11208 computed tomography (none) femur, percent of total volume that is cortical bone   [%]  femur_pct_cort QTL population f 16wks N=999 2001
Beamer2 11209 computed tomography (none) femur, surface area to tissue volume (index)   [ratio]  femur_ratio QTL population f 16wks N=999 2001
Beamer2 11210 computed tomography (none) femur, length (condyles to rostral tip of greater trochanter)   [mm]  femur_length QTL population f 16wks N=999 2001
Beamer2 11211 computed tomography (none) femur, average cortical thickness (mid-diaphysis)   [mm]  femur_thickness QTL population f 16wks N=999 2001
Beamer2 11212 computed tomography (none) femur, medial to lateral width (mid-diaphysis)   [mm]  femur_ML QTL population f 16wks N=999 2001
Beamer2 11213 computed tomography (none) femur, anterior to posterior (rostral to caudal) width (mid-diaphysis)   [mm]  femur_AP QTL population f 16wks N=999 2001
Beamer2 11214 computed tomography (none) femur, ratio of medial-lateral (ML) to anterior-posterior (AP)   [ratio]  femur_ML_AP QTL population f 16wks N=999 2001
Beamer2 11222 computed tomography (none) trabecular bone, surface area to volume (ratio)   [ratio]  trab_ratio QTL population f 16wks N=999 2001
Beamer2 11223 computed tomography (none) trabecular bone, average thickness   [mm]  trab_thickness QTL population f 16wks N=999 2001
Beamer2 11224 computed tomography (none) trabecular bone, average number   [n]  trab_number QTL population f 16wks N=999 2001
Beamer2 11225 computed tomography (none) trabecular bone, average spacing   [mm]  trab_spacing QTL population f 16wks N=999 2001
Burke1 26301 computed tomography (none) right femur length   [mm]  Femur_length QTL population f 80wks N=505 2012
Burke1 26302 computed tomography (none) caudal 8 (C8) vertebra length   [mm]  Vert_length QTL population f 80wks N=505 2012
Burke1 26303 computed tomography (none) vertebra bone volume fraction   [%]  Vert_BVF QTL population f 80wks N=505 2012
Burke1 26304 computed tomography (none) vertebra trabecular plate number (number of trabeculae per mm along a cross-sectional line of the CT scan of the vertebral bone   [n]  Vert_TPN QTL population f 80wks N=505 2012
Burke1 26801 computed tomography (none) right femur length   [mm]  Femur_length QTL population f 80wks N=832 2012
    Donahue2 17216 computed tomography (none) cross sectional bone area (whole thigh area minus muscle area), femoral mid-diaphysis   [mm2]  femur_area inbred 10 both 16wks N=11 2004
    Donahue2 17217 computed tomography (none) cortical thickness of right femur, pQCT   [mm]  femur_thickness_R1 inbred 10 both 16wks N=11 2004
    Donahue2 17218 computed tomography (none) cortical thickness of right femur, µCT   [mm]  femur_thickness_R2 inbred 10 both 16wks N=11 2004
    Donahue2 17219 computed tomography (none) cortical thickness of left femur, pQCT   [mm]  femur_thickness_L inbred 10 both 16wks N=10 2004
    Donahue2 17220 computed tomography (none) periosteal (outer) circumference, femoral mid-diaphysis   [mm]  femur_out inbred 10 both 16wks N=10 2004
    Donahue2 17221 computed tomography (none) endosteal (inner) circumference, femoral mid-diaphysis   [mm]  femur_in inbred 10 both 16wks N=10 2004
    Iraqi1 49501 computed tomography P.gingivalis and F.nucleatum  control bone volume of the maxillary jaw (x 10-3), uninfected   [mm3]  control_bone_vol CC pre 21 both 8wks N=4 2013
    Iraqi1 49502 computed tomography P.gingivalis and F.nucleatum residual bone volume of the maxillary jaw (x 10-3), post-infection (peridontitis)   [mm3]  residual_bone_vol CC pre 23 both 8wks N=3 2013
    Levy1 54903 computed tomography (none) femur length   [mm]  femur_length CC pre 27 both 8-14wks N=3 2015
    Levy1 54904 computed tomography (none) trabecular bone volume fraction of femur (BVTV)   [%]  Tb_volume CC pre 27 both 8-14wks N=3 2015
    Levy1 54905 computed tomography (none) trabecular bone connectivity density of femur (Conn.D)   [mm-3]  Tb_connectivity CC pre 27 both 8-14wks N=3 2015
    Levy1 54906 computed tomography (none) trabecular bone number of femur (Tb.N)   [mm-1]  Tb_number CC pre 27 both 8-14wks N=3 2015
    Levy1 54907 computed tomography (none) trabecular bone thickness of femur (Tb.Th)   [µm]  Tb_thickness CC pre 27 both 8-14wks N=3 2015
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