Procedure:   colony observation


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Data set MPD ID Procedure / Protocol Drug or Challenge Phenotype Measure Panel No. of Strains Sex Age Sample Size (Avg) Year
Ankra-Badu1 21201 colony observation (none) fraternal litter size at day 12 after birth   [n]  DAY12 QTL population both 2wks N=503 2009
    Bennett2 36901 colony observation (none) mouse appearance description   [designation]  appearance ILSXISS f None 2005
Brockmann1 21301 colony observation (none) number of offspring per litter: 3 classes   [n]  pupsize QTL population both 6wks N=138 2009
Brockmann1 21501 colony observation (none) number of offspring per litter: 5 classes   [n]  pupsize QTL population both 6wks N=201 2009
    Chesler2 43441 colony observation (none) number of mice born in first litter   [n]  litter_size CC diallel w/CC8 62 both 4wks N=8 2011
    Chesler2 43442 colony observation (none) parental age at first litter   [d]  age_first_litter CC diallel w/CC8 62 both 4wks N=8 2011
    Chesler2 43443 colony observation (none) time from mate to first litter   [d]  duration_to_litter CC diallel w/CC8 62 both 4wks N=8 2011
    Chesler3 43541 colony observation (none) number of mice born in first litter   [n]  litter_size CC pre w/CC8 299 both 4wks N=2 2011
    Chesler3 43542 colony observation (none) parental age at first litter   [d]  age_first_litter CC pre w/CC8 299 both 4wks N=2 2011
    Chesler3 43543 colony observation (none) time from mate to first litter   [d]  duration_to_litter CC pre w/CC8 299 both 4wks N=2 2011
    Donahue10 41902 colony observation (none) mean litter interval   [wks]  litter_interval B6.A consomic 20 f 3-53wks N=8 2011
    Donahue10 41904 colony observation (none) mean number of pups born   [n]  litter_size_birth B6.A consomic 20 f 3-53wks N=8 2011
    Donahue10 41905 colony observation (none) mean number of pups weaned   [n]  litter_size_wean B6.A consomic 20 f 3-53wks N=8 2011
    Donahue10 41906 colony observation (none) mean litter size divided by mean litter interval   [n/wks]  fecundity_index B6.A consomic 20 f 3-53wks N=8 2011
    Donahue10 41907 colony observation (none) ratio of pups weaned to pups born   [ratio]  ratio_wean_born B6.A consomic 20 f 3-53wks N=8 2011
    Donahue10 41908 colony observation (none) percent females at weaning   [%]  pct_Fwean B6.A consomic 20 f 3-53wks N=8 2011
    Donahue11 42002 colony observation (none) mean litter interval   [wks]  litter_interval B6.PWD consomic 26 f 4-55wks N=7 2011
    Donahue11 42003 colony observation (none) mean number of pups born   [n]  litter_size_birth B6.PWD consomic 26 f 4-55wks N=11 2011
    Donahue11 42004 colony observation (none) mean number of pups weaned   [n]  litter_size_wean B6.PWD consomic 26 f 4-55wks N=11 2011
    Donahue11 42005 colony observation (none) ratio of pups weaned to pups born   [ratio]  ratio_wean_born B6.PWD consomic 26 f 4-55wks N=11 2011
    Donahue11 42006 colony observation (none) mean litter size divided by mean litter interval   [n/wks]  fecundity_index B6.PWD consomic 26 f 4-55wks N=7 2011
    Donahue11 42007 colony observation (none) percent females at weaning   [%]  pct_Fwean B6.PWD consomic 26 f 4-55wks N=11 2011
    Donahue12 42102 colony observation (none) mean litter interval   [wks]  litter_interval AXB BXA 28 f 3-50wks N=8 2011
    Donahue12 42103 colony observation (none) mean number of pups born   [n]  litter_size_birth AXB BXA 28 f 3-50wks N=8 2011
    Donahue12 42104 colony observation (none) mean number of pups weaned   [n]  litter_size_wean AXB BXA 28 f 3-50wks N=8 2011
    Donahue12 42105 colony observation (none) ratio of pups weaned to pups born   [ratio]  ratio_wean_born AXB BXA 28 f 3-50wks N=8 2011
    Donahue12 42106 colony observation (none) mean litter size divided by mean litter interval   [n/wks]  fecundity_index AXB BXA 28 f 3-50wks N=8 2011
    Donahue12 42107 colony observation (none) percent females at weaning   [%]  pct_Fwean AXB BXA 28 f 3-50wks N=8 2011
    Donahue13 42202 colony observation (none) mean litter interval   [wks]  litter_interval CXB 13 f 3-50wks N=8 2011
    Donahue13 42203 colony observation (none) mean number of pups born   [n]  litter_size_birth CXB 13 f 3-50wks N=8 2011
    Donahue13 42204 colony observation (none) mean number of pups weaned   [n]  litter_size_wean CXB 13 f 3-50wks N=8 2011
    Donahue13 42205 colony observation (none) ratio of pups weaned to pups born   [ratio]  ratio_wean_born CXB 13 f 3-50wks N=8 2011
    Donahue13 42206 colony observation (none) mean litter size divided by mean litter interval   [n/wks]  fecundity_index CXB 13 f 3-50wks N=8 2011
    Donahue13 42207 colony observation (none) percent females at weaning   [%]  pct_Fwean CXB 13 f 3-50wks N=8 2011
    Donahue14 42302 colony observation (none) mean litter interval   [wks]  litter_interval BXD 40 f 3-60wks N=4 2011
    Donahue14 42303 colony observation (none) mean number of pups born   [n]  litter_size_birth BXD 42 f 3-60wks N=6 2011
    Donahue14 42304 colony observation (none) mean number of pups weaned   [n]  litter_size_wean BXD 42 f 3-60wks N=6 2011
    Donahue14 42305 colony observation (none) ratio of pups weaned to pups born   [ratio]  ratio_wean_born BXD 42 f 3-60wks N=6 2011
    Donahue14 42306 colony observation (none) mean litter size divided by mean litter interval   [n/wks]  fecundity_index BXD 40 f 3-60wks N=4 2011
    Donahue14 42307 colony observation (none) percent females at weaning   [%]  pct_Fwean BXD 42 f 3-60wks N=6 2011
    Donahue15 42402 colony observation (none) mean litter interval   [wks]  litter_interval BXH 11 f 3-55wks N=8 2011
    Donahue15 42403 colony observation (none) mean number of pups born   [n]  litter_size_birth BXH 11 f 3-55wks N=8 2011
    Donahue15 42404 colony observation (none) mean number of pups weaned   [n]  litter_size_wean BXH 11 f 3-55wks N=8 2011
    Donahue15 42405 colony observation (none) ratio of pups weaned to pups born   [ratio]  ratio_wean_born BXH 11 f 3-55wks N=8 2011
    Donahue15 42406 colony observation (none) mean litter size divided by mean litter interval   [n/wks]  fecundity_index BXH 11 f 3-55wks N=8 2011
    Donahue15 42407 colony observation (none) percent females at weaning   [%]  pct_Fwean BXH 11 f 3-55wks N=8 2011
    Donahue17 44301 colony observation (none) mean litter interval   [wks]  litter_interval BXD 30 f 3-57wks N=8 2011
    Donahue17 44302 colony observation (none) mean number of pups born   [n]  litter_size_birth BXD 30 f 3-57wks N=8 2011
    Donahue17 44303 colony observation (none) mean number of pups weaned   [n]  litter_size_wean BXD 30 f 3-57wks N=8 2011
    Donahue17 44304 colony observation (none) ratio of pups weaned to pups born   [ratio]  ratio_wean_born BXD 30 f 3-57wks N=8 2011
    Donahue17 44305 colony observation (none) mean litter size divided by mean litter interval   [n/wks]  fecundity_index BXD 30 f 3-57wks N=8 2011
    Donahue17 44306 colony observation (none) percent females at weaning   [%]  pct_Fwean BXD 30 f 3-57wks N=8 2011
    Donahue18 44403 colony observation (none) number of pups born per litter   [n]  total_born inbred 15 f 6-8wks N=17 2010
    Donahue18 44404 colony observation (none) percent of pups that survived to day 3   [%]  pup_survival inbred 15 f 6-8wks N=17 2010
    Donahue19 44503 colony observation (none) number of pups born per litter   [n]  total_born B6.A consomic w/par 22 f 6-8wks N=15 2010
    Donahue19 44504 colony observation (none) percent of pups that survived to day 3   [%]  pup_survival B6.A consomic w/par 22 f 6-8wks N=15 2010
    Hadsell1 49401 colony observation (none) number of pups born in second litter (biological)   [n]  pups_born inbred 31 f 14-18wks N=10 2012
    Hadsell1 49403 colony observation (none) number of cross-fostered pups that survived to day 8 (max=10)   [n]  pups_d8 inbred 31 f 14-18wks N=10 2012
    Jax3 14932 colony observation (none) age of dam at birth of first litter   [d]  age_dam_lit1 inbred 33 f None 1991
    Jax3 14933 colony observation (none) number of litters per dam   [n]  littersborn inbred 33 f 4-30wks 1991
    Jax3 14934 colony observation (none) percent matings that were nonproductive   [%]  pct_nonprod inbred 33 f 4-30wks 1991
    Jax3 14938 colony observation (none) number of mice per litter   [n]  mice_per_litter inbred 33 f 4-30wks 1991
    Jax3 14941 colony observation (none) number of mice born per dam   [n]  miceborn inbred 33 f 4-30wks 1991
    Jax3 14942 colony observation (none) number of mice weaned per dam   [n]  miceweaned inbred 33 f 4-30wks 1991
    Jax3 14943 colony observation (none) percent pups weaned (of total born)   [%]  pct_wean inbred 33 f 4-30wks 1991
    Jax3 14948 colony observation (none) percent males at weaning   [%]  pct_male_wean inbred 33 f 4-30wks 1991
    Jax5 31401 colony observation (none) total number of litters per dam   [n]  total_litters inbred 35 f 6-40wks N=47 2009
    Jax5 31402 colony observation (none) latency to first litter per dam (dam age at first litter minus age at mate)   [wks]  latency_first_litter inbred 35 f 6-40wks N=47 2009
    Jax5 31403 colony observation (none) mean interval between consecutive litters per dam   [d]  mean_interval inbred 35 f 6-40wks N=44 2009
    Jax5 31404 colony observation (none) number of pups born per litter   [n]  born inbred 35 f 6-40wks N=186 2009
    Jax5 31405 colony observation (none) number of pups weaned per litter   [n]  wean inbred 35 f 6-40wks N=186 2009
    Jax5 31406 colony observation (none) wean to born ratio per litter   [ratio]  wean_born_ratio inbred 35 f 6-40wks N=186 2009
    Jax5 31407 colony observation (none) total number of pups born per dam   [n]  born_total inbred 35 f 6-40wks N=47 2009
    Jax5 31408 colony observation (none) mean number of pups born based on mean number of litters per dam   [n]  born_mean inbred 35 f 6-40wks N=47 2009
    Jax5 31409 colony observation (none) total number of pups weaned per dam   [n]  wean_total inbred 35 f 6-40wks N=47 2009
    Jax5 31410 colony observation (none) mean number of pups weaned based on mean number of litters per dam   [n]  wean_mean inbred 35 f 6-40wks N=47 2009
    Jax5 31411 colony observation (none) wean to born ratio per dam, adjusted for biological parameters   [ratio]  parenting_index inbred 35 f 6-40wks N=39 2009
    Jax5 31412 colony observation (none) total pups weaned per dam over mean interval between litters, adjusted for biological parameters   [n/d]  fecundity_index inbred 35 f 6-40wks N=44 2009
    Jax5 31413 colony observation (none) percent females weaned per dam   [%]  pct_female_dam inbred 35 f 6-40wks N=46 2009
    Jax5 31414 colony observation (none) female to male ratio per dam, adjusted for biological parameters   [ratio]  sex_ratio inbred 35 f 6-40wks N=39 2009
    Jax5 31483 colony observation (none) age at first litter   [wks]  age_first_litter inbred 35 f None N=47 2009
Karst1 26001 colony observation (none) litter size at day of weaning (day 21) (s ='small' mice; b = 'big' mice )  WG21 QTL population both 3wks N=166 2011
Karst1 26002 colony observation (none) coat color (white = 0, black = 1)  color QTL population both 10wks N=166 2011
    Nelson1 34109 colony observation restricted diet lifespan   [d]     control    DR diet ILSXISS 41 both varies N=5 2010
    Yuan2 23201 colony observation (none) median lifespan   [d]  lifespan_median inbred 31 both varies 2007
    Yuan2 23401 colony observation (none) lifespan   [d]  lifespandays inbred 31 both varies N=31 2007
    Yuan4 25402 colony observation (none) age at vaginal opening (patency)   [d]  age_VO inbred 33 f 2-7wks N=38 2009
Zhang1 27902 colony observation western diet  12wks skin color  Skin_color QTL population f 18wks N=266 2012
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Other available data sets:
Data set Procedure What's in this data set Strains
Tested
Sex Age Year
Jax4 colony observation Appearance, coat color None None inbred  (61) both 2006
ITP1 colony observation Life span study. Various treatments vs. controls. survival, aging, 17-a-estradiol, acarbose, fish oil, metformin, metformin and rapamycin, nordihydroguaiaretic acid, Protandim, ursodeoxycholic acid 17aE2, ACA, NDGA, UDCA UM-HET3 population both 2017