Project measure / variable:   Peters1   MPV

ID, description, units MPD:6220   MPV   mean platelet volume (MPV)   [fL]  
Data set, strains Peters1   inbred w/CC7   43 strains     sex: both     age: 10wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters1 - mean platelet volume (MPV)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested43 strains43 strains
Mean of the strain means6.53   fL 7.01   fL
Median of the strain means5.64   fL 6.41   fL
SD of the strain means± 2.28 ± 2.24
Coefficient of variation (CV)0.350 0.320
Min–max range of strain means4.34   –   13.5   fL 4.38   –   14.8   fL
Mean sample size per strain11.7   mice 11.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 26.2571 26.2571 4.0209 0.0452
strain 42 3429.0194 81.6433 12.5025 < 0.0001
sex:strain 42 1318.214 31.386 4.8063 < 0.0001
Residuals 917 5988.1538 6.5302


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 5.57 1.83   14 0.489 0.328 4.0, 10.7 -0.42
129S1/SvImJ m 5.71 1.21   15 0.313 0.212 3.8, 7.4 -0.58
A/J f 4.72 0.0789   10 0.0249 0.0167 4.6, 4.9 -0.79
A/J m 6.23 2.94   10 0.928 0.471 4.0, 12.2 -0.35
AKR/J f 5.01 0.12   10 0.0379 0.0239 4.8, 5.2 -0.66
AKR/J m 5.73 1.08   9 0.36 0.188 4.8, 7.7 -0.57
BALB/cByJ f 7.21 5.3   15 1.37 0.735 3.8, 17.1 0.3
BALB/cByJ m 8.37 5.08   29 0.943 0.607 3.7, 17.6 0.61
BALB/cJ f 5.53 1.51   11 0.454 0.273 4.7, 8.9 -0.44
BALB/cJ m 14.8 5.44   5 2.43 0.368 8.2, 22.0 3.47
BTBR T+ Itpr3tf/J f 6.11 1.32   10 0.416 0.216 5.1, 9.6 -0.18
BTBR T+ Itpr3tf/J m 6.73 3.15   10 0.997 0.469 4.7, 14.9 -0.13
BUB/BnJ f 9.62 4.88   14 1.3 0.507 4.2, 19.0 1.35
BUB/BnJ m 9.92 6.47   10 2.05 0.652 5.9, 21.9 1.3
C3H/HeJ f 6.77 0.508   10 0.161 0.075 6.2, 7.7 0.11
C3H/HeJ m 8.52 1.57   10 0.495 0.184 5.7, 11.3 0.67
C57BL/10J f 5.51 1.65   20 0.37 0.3 4.0, 9.7 -0.45
C57BL/10J m 6.12 1.36   15 0.352 0.223 4.0, 9.2 -0.4
C57BL/6J f 7.01 2.64   11 0.795 0.376 3.9, 12.1 0.21
C57BL/6J m 7.06 1.34   11 0.403 0.189 6.1, 10.4 0.02
C57BLKS/J f 5.94 0.263   10 0.0833 0.0443 5.7, 6.4 -0.26
C57BLKS/J m 9.18 4.37   10 1.38 0.477 4.4, 16.3 0.97
C57BR/cdJ f 6.98 3.82   10 1.21 0.547 4.1, 15.5 0.2
C57BR/cdJ m 5.97 1.98   12 0.573 0.332 4.7, 11.5 -0.47
C57L/J f 4.71 1.48   12 0.428 0.315 3.7, 8.7 -0.8
C57L/J m 7.09 2.82   15 0.728 0.398 3.9, 13.7 0.03
C58/J f 5.39 0.388   11 0.117 0.0721 5.0, 6.3 -0.5
C58/J m 5.34 0.388   9 0.129 0.0725 4.9, 6.1 -0.75
CAST/EiJ f 5.21 1.11   12 0.322 0.214 4.2, 7.0 -0.58
CAST/EiJ m 7.08 1.47   11 0.442 0.207 4.5, 9.4 0.03
CBA/J f 4.83 0.339   9 0.113 0.0702 4.6, 5.7 -0.74
CBA/J m 4.8 0.211   10 0.0667 0.0439 4.6, 5.3 -0.99
CE/J f 5.15 0.651   13 0.181 0.127 4.2, 6.7 -0.6
CE/J m 6.16 2.83   8 1.0 0.459 4.0, 12.8 -0.38
CZECHII/EiJ f 5.4 1.38   11 0.416 0.255 4.3, 8.3 -0.49
CZECHII/EiJ m 4.38 0.289   11 0.0872 0.066 4.1, 5.2 -1.17
DBA/1J f 6.36 0.997   14 0.266 0.157 3.9, 7.4 -0.07
DBA/1J m 5.57 2.54   11 0.765 0.456 3.9, 11.8 -0.64
DBA/2J f 5.08 1.25   13 0.347 0.246 3.9, 8.0 -0.63
DBA/2J m 5.8 1.85   10 0.586 0.32 4.0, 8.8 -0.54
FVB/NJ f 4.92 1.72   12 0.496 0.35 3.7, 9.0 -0.7
FVB/NJ m 5.01 1.41   12 0.408 0.282 3.6, 8.2 -0.89
I/LnJ f 6.68 1.94   13 0.539 0.291 4.0, 10.0 0.07
I/LnJ m 11.2 2.46   14 0.658 0.221 8.1, 17.2 1.87
JF1/MsJ f 4.34 0.48   11 0.145 0.111 3.8, 5.2 -0.96
JF1/MsJ m 5.64 1.39   16 0.348 0.247 3.7, 7.4 -0.61
KK/HlJ f 5.88 0.464   14 0.124 0.079 5.2, 7.0 -0.28
KK/HlJ m 6.64 0.864   11 0.261 0.13 5.4, 8.1 -0.17
LP/J f 6.63 1.29   15 0.332 0.194 4.9, 9.3 0.04
LP/J m 6.03 1.32   10 0.416 0.218 4.6, 9.2 -0.44
MA/MyJ f 4.99 1.41   12 0.407 0.282 4.0, 9.1 -0.67
MA/MyJ m 4.62 1.08   13 0.298 0.233 3.7, 7.1 -1.07
MOLF/EiJ f 13.3 5.91   13 1.64 0.443 3.8, 23.1 2.97
MOLF/EiJ m 9.04 3.8   15 0.982 0.421 4.2, 17.0 0.9
MSM/MsJ f 4.8 1.71   11 0.516 0.356 3.6, 8.1 -0.76
MSM/MsJ m 4.84 1.26   11 0.379 0.26 3.8, 7.2 -0.97
NOD/ShiLtJ f 6.19 0.438   10 0.139 0.0708 5.8, 7.3 -0.15
NOD/ShiLtJ m 6.64 1.22   10 0.385 0.183 5.5, 9.9 -0.17
NON/ShiLtJ f 5.85 0.788   10 0.249 0.135 5.0, 7.0 -0.3
NON/ShiLtJ m 7.02 3.19   10 1.01 0.454 5.0, 13.9 0.0
NZB/BlNJ f 9.97 2.03   12 0.585 0.203 5.2, 13.2 1.51
NZB/BlNJ m 8.6 1.48   9 0.495 0.173 6.8, 10.8 0.71
NZW/LacJ f 9.64 3.6   12 1.04 0.373 6.0, 16.3 1.36
NZW/LacJ m 11.2 1.95   10 0.617 0.174 7.9, 13.9 1.87
PERA/EiJ f 5.07 0.764   11 0.23 0.151 3.9, 6.5 -0.64
PERA/EiJ m 4.51 0.564   8 0.199 0.125 3.7, 5.6 -1.12
PL/J f 13.5 3.28   16 0.821 0.243 5.8, 18.9 3.05
PL/J m 4.73 0.245   10 0.0775 0.0518 4.6, 5.4 -1.02
PWK/PhJ f 5.82 2.75   13 0.763 0.472 3.8, 12.1 -0.31
PWK/PhJ m 6.8 1.91   12 0.55 0.28 3.9, 12.1 -0.1
RF/J f 5.31 0.742   10 0.234 0.14 4.7, 6.7 -0.53
RF/J m 8.01 5.35   15 1.38 0.669 3.9, 18.2 0.44
RIIIS/J f 5.41 0.659   11 0.199 0.122 4.7, 6.6 -0.49
RIIIS/J m 5.36 1.03   16 0.258 0.192 3.5, 7.2 -0.74
SEA/GnJ f 12.8 4.27   10 1.35 0.332 6.4, 18.8 2.75
SEA/GnJ m 11.2 2.57   8 0.908 0.229 8.5, 16.1 1.87
SJL/J f 5.64 0.262   8 0.0925 0.0464 5.3, 6.1 -0.39
SJL/J m 7.37 2.89   13 0.801 0.392 4.3, 11.6 0.16
SM/J f 5.49 0.511   11 0.154 0.093 4.3, 6.1 -0.45
SM/J m 5.74 0.165   10 0.0521 0.0287 5.5, 6.1 -0.57
SPRET/EiJ f 4.49 0.197   11 0.0595 0.0439 4.2, 4.8 -0.89
SPRET/EiJ m 4.55 0.649   11 0.196 0.142 4.1, 6.4 -1.1
SWR/J f 8.36 3.2   13 0.886 0.382 4.0, 12.8 0.8
SWR/J m 9.85 6.1   10 1.93 0.62 5.4, 26.0 1.27
WSB/EiJ f 7.51 2.11   10 0.666 0.281 4.4, 10.7 0.43
WSB/EiJ m 6.41 1.24   9 0.412 0.193 4.7, 8.4 -0.27


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 5.5714 0.683 6.9118 4.2311
129S1/SvImJ m 5.7133 0.6598 7.0082 4.4184
A/J f 4.72 0.8081 6.3059 3.1341
A/J m 6.23 0.8081 7.8159 4.6441
AKR/J f 5.01 0.8081 6.5959 3.4241
AKR/J m 5.7333 0.8518 7.405 4.0616
BALB/cByJ f 7.2133 0.6598 8.5082 5.9184
BALB/cByJ m 8.3655 0.4745 9.2968 7.4342
BALB/cJ f 5.5273 0.7705 7.0394 4.0151
BALB/cJ m 14.78 1.1428 17.0228 12.5372
BTBR T+ Itpr3tf/J f 6.11 0.8081 7.6959 4.5241
BTBR T+ Itpr3tf/J m 6.73 0.8081 8.3159 5.1441
BUB/BnJ f 9.6214 0.683 10.9618 8.2811
BUB/BnJ m 9.92 0.8081 11.5059 8.3341
C3H/HeJ f 6.77 0.8081 8.3559 5.1841
C3H/HeJ m 8.52 0.8081 10.1059 6.9341
C57BL/10J f 5.51 0.5714 6.6314 4.3886
C57BL/10J m 6.12 0.6598 7.4149 4.8251
C57BL/6J f 7.0091 0.7705 8.5212 5.497
C57BL/6J m 7.0636 0.7705 8.5758 5.5515
C57BLKS/J f 5.94 0.8081 7.5259 4.3541
C57BLKS/J m 9.18 0.8081 10.7659 7.5941
C57BR/cdJ f 6.98 0.8081 8.5659 5.3941
C57BR/cdJ m 5.9667 0.7377 7.4144 4.5189
C57L/J f 4.7083 0.7377 6.1561 3.2606
C57L/J m 7.0867 0.6598 8.3816 5.7918
C58/J f 5.3909 0.7705 6.903 3.8788
C58/J m 5.3444 0.8518 7.0162 3.6727
CAST/EiJ f 5.2083 0.7377 6.6561 3.7606
CAST/EiJ m 7.0818 0.7705 8.5939 5.5697
CBA/J f 4.8333 0.8518 6.505 3.1616
CBA/J m 4.8 0.8081 6.3859 3.2141
CE/J f 5.1462 0.7087 6.5371 3.7552
CE/J m 6.1625 0.9035 7.9356 4.3894
CZECHII/EiJ f 5.4 0.7705 6.9121 3.8879
CZECHII/EiJ m 4.3818 0.7705 5.8939 2.8697
DBA/1J f 6.3643 0.683 7.7046 5.0239
DBA/1J m 5.5727 0.7705 7.0849 4.0606
DBA/2J f 5.0846 0.7087 6.4756 3.6937
DBA/2J m 5.8 0.8081 7.3859 4.2141
FVB/NJ f 4.9167 0.7377 6.3644 3.4689
FVB/NJ m 5.0083 0.7377 6.4561 3.5606
I/LnJ f 6.6846 0.7087 8.0756 5.2937
I/LnJ m 11.15 0.683 12.4904 9.8096
JF1/MsJ f 4.3364 0.7705 5.8485 2.8242
JF1/MsJ m 5.6438 0.6389 6.8975 4.39
KK/HlJ f 5.8786 0.683 7.2189 4.5382
KK/HlJ m 6.6364 0.7705 8.1485 5.1242
LP/J f 6.6267 0.6598 7.9216 5.3318
LP/J m 6.03 0.8081 7.6159 4.4441
MA/MyJ f 4.9917 0.7377 6.4394 3.5439
MA/MyJ m 4.6154 0.7087 6.0063 3.2244
MOLF/EiJ f 13.3462 0.7087 14.7371 11.9552
MOLF/EiJ m 9.04 0.6598 10.3349 7.7451
MSM/MsJ f 4.8 0.7705 6.3121 3.2879
MSM/MsJ m 4.8364 0.7705 6.3485 3.3242
NOD/ShiLtJ f 6.19 0.8081 7.7759 4.6041
NOD/ShiLtJ m 6.64 0.8081 8.2259 5.0541
NON/ShiLtJ f 5.85 0.8081 7.4359 4.2641
NON/ShiLtJ m 7.02 0.8081 8.6059 5.4341
NZB/BlNJ f 9.9667 0.7377 11.4144 8.5189
NZB/BlNJ m 8.6 0.8518 10.2717 6.9283
NZW/LacJ f 9.6417 0.7377 11.0894 8.1939
NZW/LacJ m 11.22 0.8081 12.8059 9.6341
PERA/EiJ f 5.0727 0.7705 6.5849 3.5606
PERA/EiJ m 4.5125 0.9035 6.2856 2.7394
PL/J f 13.5 0.6389 14.7538 12.2462
PL/J m 4.73 0.8081 6.3159 3.1441
PWK/PhJ f 5.8231 0.7087 7.214 4.4321
PWK/PhJ m 6.8 0.7377 8.2477 5.3523
RF/J f 5.31 0.8081 6.8959 3.7241
RF/J m 8.0067 0.6598 9.3016 6.7118
RIIIS/J f 5.4091 0.7705 6.9212 3.897
RIIIS/J m 5.3625 0.6389 6.6163 4.1087
SEA/GnJ f 12.85 0.8081 14.4359 11.2641
SEA/GnJ m 11.2 0.9035 12.9731 9.4269
SJL/J f 5.6375 0.9035 7.4106 3.8644
SJL/J m 7.3692 0.7087 8.7602 5.9783
SM/J f 5.4909 0.7705 7.003 3.9788
SM/J m 5.74 0.8081 7.3259 4.1541
SPRET/EiJ f 4.4909 0.7705 6.003 2.9788
SPRET/EiJ m 4.5545 0.7705 6.0667 3.0424
SWR/J f 8.3615 0.7087 9.7525 6.9706
SWR/J m 9.85 0.8081 11.4359 8.2641
WSB/EiJ f 7.51 0.8081 9.0959 5.9241
WSB/EiJ m 6.4111 0.8518 8.0828 4.7394


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 5.6424 0.4748 6.5742 4.7105
A/J both 5.475 0.5714 6.5964 4.3536
AKR/J both 5.3717 0.5871 6.5238 4.2195
BALB/cByJ both 7.7894 0.4064 8.5869 6.9919
BALB/cJ both 10.1536 0.6891 11.5061 8.8012
BTBR T+ Itpr3tf/J both 6.42 0.5714 7.5414 5.2986
BUB/BnJ both 9.7707 0.529 10.8089 8.7325
C3H/HeJ both 7.645 0.5714 8.7664 6.5236
C57BL/10J both 5.815 0.4364 6.6715 4.9585
C57BL/6J both 7.0364 0.5448 8.1056 5.9671
C57BLKS/J both 7.56 0.5714 8.6814 6.4386
C57BR/cdJ both 6.4733 0.5471 7.547 5.3997
C57L/J both 5.8975 0.4949 6.8687 4.9263
C58/J both 5.3677 0.5743 6.4947 4.2406
CAST/EiJ both 6.1451 0.5333 7.1918 5.0984
CBA/J both 4.8167 0.5871 5.9688 3.6645
CE/J both 5.6543 0.5741 6.7811 4.5275
CZECHII/EiJ both 4.8909 0.5448 5.9601 3.8217
DBA/1J both 5.9685 0.5148 6.9788 4.9582
DBA/2J both 5.4423 0.5374 6.497 4.3876
FVB/NJ both 4.9625 0.5216 5.9862 3.9388
I/LnJ both 8.9173 0.4921 9.8831 7.9515
JF1/MsJ both 4.9901 0.5004 5.9722 4.0079
KK/HlJ both 6.2575 0.5148 7.2678 5.2471
LP/J both 6.3283 0.5216 7.352 5.3046
MA/MyJ both 4.8035 0.5115 5.8074 3.7997
MOLF/EiJ both 11.1931 0.4842 12.1433 10.2429
MSM/MsJ both 4.8182 0.5448 5.8874 3.7489
NOD/ShiLtJ both 6.415 0.5714 7.5364 5.2936
NON/ShiLtJ both 6.435 0.5714 7.5564 5.3136
NZB/BlNJ both 9.2833 0.5634 10.3891 8.1776
NZW/LacJ both 10.4308 0.5471 11.5045 9.3572
PERA/EiJ both 4.7926 0.5937 5.9578 3.6274
PL/J both 9.115 0.5151 10.1258 8.1042
PWK/PhJ both 6.3115 0.5115 7.3154 5.3077
RF/J both 6.6583 0.5216 7.682 5.6346
RIIIS/J both 5.3858 0.5004 6.3679 4.4036
SEA/GnJ both 12.025 0.6061 13.2144 10.8356
SJL/J both 6.5034 0.5741 7.6302 5.3766
SM/J both 5.6155 0.5583 6.7111 4.5198
SPRET/EiJ both 4.5227 0.5448 5.592 3.4535
SWR/J both 9.1058 0.5374 10.1605 8.051
WSB/EiJ both 6.9606 0.5871 8.1127 5.8084




  GWAS USING LINEAR MIXED MODELS