Project measure / variable:   Peters1   MCH

ID, description, units MPD:6206   MCH   mean RBC corpuscular hemoglobin (MCH)   [pg]  
Data set, strains Peters1   inbred w/CC7   43 strains     sex: both     age: 10wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters1 - mean RBC corpuscular hemoglobin (MCH)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested43 strains43 strains
Mean of the strain means16.0   pg 15.7   pg
Median of the strain means16.1   pg 15.7   pg
SD of the strain means± 0.751 ± 0.782
Coefficient of variation (CV)0.0470 0.0498
Min–max range of strain means13.8   –   17.6   pg 13.6   –   17.0   pg
Mean sample size per strain11.7   mice 11.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 23.1211 23.1211 61.2645 < 0.0001
strain 42 508.8633 12.1158 32.1035 < 0.0001
sex:strain 42 72.3214 1.7219 4.5627 < 0.0001
Residuals 918 346.451 0.3774


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 16.6 0.428   14 0.114 0.0258 15.8, 17.3 0.79
129S1/SvImJ m 15.2 0.25   15 0.0645 0.0164 14.9, 16.0 -0.64
A/J f 15.5 0.257   10 0.0814 0.0166 15.2, 16.1 -0.67
A/J m 15.0 0.96   10 0.304 0.0642 12.3, 15.5 -0.9
AKR/J f 16.5 0.683   10 0.216 0.0415 15.1, 17.4 0.66
AKR/J m 15.3 0.268   9 0.0894 0.0175 15.0, 15.7 -0.51
BALB/cByJ f 16.6 0.535   15 0.138 0.0323 15.9, 17.7 0.79
BALB/cByJ m 16.1 0.597   29 0.111 0.037 15.3, 17.5 0.51
BALB/cJ f 16.0 0.264   11 0.0796 0.0165 15.7, 16.5 -0.01
BALB/cJ m 17.0 0.472   5 0.211 0.0277 16.3, 17.5 1.66
BTBR T+ Itpr3tf/J f 16.6 0.479   10 0.151 0.0288 15.7, 17.3 0.79
BTBR T+ Itpr3tf/J m 16.1 0.568   10 0.18 0.0353 15.5, 17.3 0.51
BUB/BnJ f 17.6 0.584   14 0.156 0.0332 16.6, 18.6 2.12
BUB/BnJ m 16.5 0.674   10 0.213 0.0407 15.9, 17.7 1.02
C3H/HeJ f 16.4 0.253   10 0.08 0.0154 16.1, 16.9 0.53
C3H/HeJ m 16.3 0.422   10 0.133 0.026 15.8, 17.3 0.77
C57BL/10J f 15.0 0.508   21 0.111 0.0338 14.0, 16.2 -1.34
C57BL/10J m 14.2 0.573   15 0.148 0.0403 12.6, 15.4 -1.92
C57BL/6J f 16.0 0.245   11 0.074 0.0153 15.6, 16.4 -0.01
C57BL/6J m 15.4 0.236   11 0.0711 0.0153 15.0, 15.8 -0.38
C57BLKS/J f 14.9 0.218   10 0.069 0.0147 14.4, 15.2 -1.47
C57BLKS/J m 15.6 1.06   10 0.334 0.0678 13.9, 17.3 -0.13
C57BR/cdJ f 16.5 1.12   10 0.354 0.0678 15.5, 19.0 0.66
C57BR/cdJ m 15.8 0.455   12 0.131 0.0288 15.0, 16.4 0.13
C57L/J f 16.0 0.368   12 0.106 0.0229 15.5, 16.7 -0.01
C57L/J m 15.6 0.596   15 0.154 0.0381 14.9, 16.9 -0.13
C58/J f 16.9 0.45   10 0.142 0.0266 16.2, 17.9 1.19
C58/J m 16.4 0.436   9 0.145 0.0266 15.5, 17.0 0.9
CAST/EiJ f 15.8 0.417   12 0.12 0.0264 15.2, 16.5 -0.27
CAST/EiJ m 16.5 0.84   11 0.253 0.051 15.4, 17.7 1.02
CBA/J f 15.4 0.162   9 0.0539 0.0105 15.1, 15.6 -0.8
CBA/J m 15.5 0.195   10 0.0616 0.0126 15.1, 15.7 -0.26
CE/J f 16.0 0.511   13 0.142 0.0318 15.3, 16.9 -0.01
CE/J m 15.6 0.488   8 0.173 0.0313 14.9, 16.3 -0.13
CZECHII/EiJ f 16.9 1.12   11 0.338 0.0663 15.7, 19.7 1.19
CZECHII/EiJ m 16.1 0.287   11 0.0866 0.0178 15.8, 16.7 0.51
DBA/1J f 13.8 0.473   14 0.126 0.0342 13.3, 14.8 -2.93
DBA/1J m 13.6 0.455   11 0.137 0.0334 12.8, 14.3 -2.69
DBA/2J f 14.4 1.08   13 0.301 0.0756 13.7, 17.9 -2.14
DBA/2J m 13.8 0.412   10 0.13 0.0297 13.3, 14.5 -2.43
FVB/NJ f 15.6 0.502   12 0.145 0.0321 14.9, 16.6 -0.54
FVB/NJ m 15.7 0.441   12 0.127 0.028 15.1, 16.4 0.0
I/LnJ f 15.1 0.38   13 0.105 0.0252 14.4, 15.7 -1.2
I/LnJ m 15.3 0.565   14 0.151 0.0368 14.3, 16.4 -0.51
JF1/MsJ f 16.3 0.579   12 0.167 0.0355 14.9, 17.3 0.39
JF1/MsJ m 16.3 0.988   16 0.247 0.0608 15.0, 18.2 0.77
KK/HlJ f 14.6 0.893   14 0.239 0.0611 11.8, 15.5 -1.87
KK/HlJ m 14.5 0.302   11 0.0909 0.0208 14.1, 15.0 -1.53
LP/J f 16.2 0.352   15 0.0909 0.0218 15.6, 16.7 0.26
LP/J m 16.2 0.752   10 0.238 0.0463 15.4, 18.1 0.64
MA/MyJ f 16.7 0.747   12 0.216 0.0447 15.4, 17.9 0.93
MA/MyJ m 15.6 0.525   13 0.146 0.0337 14.7, 16.6 -0.13
MOLF/EiJ f 16.8 0.718   13 0.199 0.0428 15.4, 18.0 1.06
MOLF/EiJ m 16.1 0.798   15 0.206 0.0495 14.9, 17.5 0.51
MSM/MsJ f 16.1 1.2   11 0.363 0.0746 13.0, 17.8 0.13
MSM/MsJ m 15.7 0.758   11 0.228 0.0483 14.6, 16.6 0.0
NOD/ShiLtJ f 16.6 0.185   10 0.0586 0.0112 16.4, 16.9 0.79
NOD/ShiLtJ m 16.9 0.71   10 0.225 0.042 16.3, 18.5 1.53
NON/ShiLtJ f 16.5 0.211   10 0.0667 0.0128 16.2, 16.9 0.66
NON/ShiLtJ m 16.3 0.601   10 0.19 0.0369 15.8, 17.8 0.77
NZB/BlNJ f 16.0 0.646   12 0.186 0.0403 14.2, 16.6 -0.01
NZB/BlNJ m 15.4 0.427   9 0.142 0.0277 14.5, 15.9 -0.38
NZW/LacJ f 16.2 0.454   12 0.131 0.028 15.5, 17.3 0.26
NZW/LacJ m 16.1 0.35   10 0.111 0.0217 15.7, 16.7 0.51
PERA/EiJ f 15.5 0.534   11 0.161 0.0345 14.8, 16.9 -0.67
PERA/EiJ m 15.8 1.15   8 0.407 0.0726 14.6, 17.7 0.13
PL/J f 16.0 0.631   16 0.158 0.0394 14.8, 17.3 -0.01
PL/J m 16.1 0.847   10 0.268 0.0528 14.0, 17.2 0.51
PWK/PhJ f 16.6 0.976   13 0.271 0.0588 15.9, 19.6 0.79
PWK/PhJ m 14.9 0.304   12 0.0878 0.0204 14.3, 15.4 -1.02
RF/J f 15.7 0.298   10 0.0943 0.019 15.2, 16.1 -0.41
RF/J m 15.6 0.699   16 0.175 0.0449 14.7, 17.4 -0.13
RIIIS/J f 16.1 0.375   9 0.125 0.0233 15.6, 16.8 0.13
RIIIS/J m 15.6 0.568   15 0.147 0.0365 14.7, 16.6 -0.13
SEA/GnJ f 15.7 0.547   10 0.173 0.0348 14.8, 16.4 -0.41
SEA/GnJ m 15.1 0.807   9 0.269 0.0534 14.4, 16.9 -0.77
SJL/J f 16.0 0.808   7 0.305 0.0504 14.9, 17.5 -0.01
SJL/J m 16.1 0.763   14 0.204 0.0475 14.9, 17.8 0.51
SM/J f 16.2 0.7   10 0.221 0.0431 15.2, 17.1 0.26
SM/J m 16.8 0.42   10 0.133 0.0251 15.8, 17.1 1.41
SPRET/EiJ f 15.0 0.191   11 0.0576 0.0127 14.8, 15.5 -1.34
SPRET/EiJ m 14.4 0.219   11 0.0661 0.0152 14.0, 14.8 -1.66
SWR/J f 16.7 0.583   13 0.162 0.0349 15.3, 17.6 0.93
SWR/J m 16.7 1.05   11 0.318 0.0631 15.5, 19.1 1.28
WSB/EiJ f 16.6 0.494   11 0.149 0.0298 15.7, 17.4 0.79
WSB/EiJ m 16.3 0.292   9 0.0973 0.018 15.8, 16.8 0.77


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 16.6214 0.1642 16.9437 16.2992
129S1/SvImJ m 15.2333 0.1586 15.5446 14.922
A/J f 15.52 0.1943 15.9013 15.1387
A/J m 14.97 0.1943 15.3513 14.5887
AKR/J f 16.47 0.1943 16.8513 16.0887
AKR/J m 15.3222 0.2048 15.7241 14.9203
BALB/cByJ f 16.5667 0.1586 16.878 16.2554
BALB/cByJ m 16.1414 0.1141 16.3653 15.9175
BALB/cJ f 15.9818 0.1852 16.3453 15.6183
BALB/cJ m 17.04 0.2747 17.5792 16.5008
BTBR T+ Itpr3tf/J f 16.65 0.1943 17.0313 16.2687
BTBR T+ Itpr3tf/J m 16.07 0.1943 16.4513 15.6887
BUB/BnJ f 17.6071 0.1642 17.9294 17.2849
BUB/BnJ m 16.54 0.1943 16.9213 16.1587
C3H/HeJ f 16.38 0.1943 16.7613 15.9987
C3H/HeJ m 16.26 0.1943 16.6413 15.8787
C57BL/10J f 15.0143 0.1341 15.2774 14.7512
C57BL/10J m 14.2067 0.1586 14.518 13.8954
C57BL/6J f 16.0273 0.1852 16.3908 15.6638
C57BL/6J m 15.4182 0.1852 15.7817 15.0547
C57BLKS/J f 14.89 0.1943 15.2713 14.5087
C57BLKS/J m 15.57 0.1943 15.9513 15.1887
C57BR/cdJ f 16.5 0.1943 16.8813 16.1187
C57BR/cdJ m 15.8 0.1773 16.148 15.452
C57L/J f 16.0333 0.1773 16.3814 15.6853
C57L/J m 15.64 0.1586 15.9513 15.3287
C58/J f 16.94 0.1943 17.3213 16.5587
C58/J m 16.3667 0.2048 16.7685 15.9648
CAST/EiJ f 15.8083 0.1773 16.1564 15.4603
CAST/EiJ m 16.4727 0.1852 16.8362 16.1092
CBA/J f 15.4111 0.2048 15.813 15.0092
CBA/J m 15.47 0.1943 15.8513 15.0887
CE/J f 16.0308 0.1704 16.3652 15.6964
CE/J m 15.6125 0.2172 16.0388 15.1862
CZECHII/EiJ f 16.9273 0.1852 17.2908 16.5638
CZECHII/EiJ m 16.1364 0.1852 16.4999 15.7728
DBA/1J f 13.8286 0.1642 14.1508 13.5063
DBA/1J m 13.6091 0.1852 13.9726 13.2456
DBA/2J f 14.3538 0.1704 14.6882 14.0195
DBA/2J m 13.85 0.1943 14.2313 13.4687
FVB/NJ f 15.6083 0.1773 15.9564 15.2603
FVB/NJ m 15.7167 0.1773 16.0647 15.3686
I/LnJ f 15.0923 0.1704 15.4267 14.7579
I/LnJ m 15.3214 0.1642 15.6437 14.9992
JF1/MsJ f 16.2917 0.1773 16.6397 15.9436
JF1/MsJ m 16.2687 0.1536 16.5702 15.9673
KK/HlJ f 14.6071 0.1642 14.9294 14.2849
KK/HlJ m 14.4909 0.1852 14.8544 14.1274
LP/J f 16.1667 0.1586 16.478 15.8554
LP/J m 16.25 0.1943 16.6313 15.8687
MA/MyJ f 16.7 0.1773 17.048 16.352
MA/MyJ m 15.5692 0.1704 15.9036 15.2348
MOLF/EiJ f 16.7692 0.1704 17.1036 16.4348
MOLF/EiJ m 16.1133 0.1586 16.4246 15.802
MSM/MsJ f 16.1182 0.1852 16.4817 15.7547
MSM/MsJ m 15.7 0.1852 16.0635 15.3365
NOD/ShiLtJ f 16.61 0.1943 16.9913 16.2287
NOD/ShiLtJ m 16.9 0.1943 17.2813 16.5187
NON/ShiLtJ f 16.5 0.1943 16.8813 16.1187
NON/ShiLtJ m 16.32 0.1943 16.7013 15.9387
NZB/BlNJ f 16.0083 0.1773 16.3564 15.6603
NZB/BlNJ m 15.3778 0.2048 15.7797 14.9759
NZW/LacJ f 16.2333 0.1773 16.5814 15.8853
NZW/LacJ m 16.14 0.1943 16.5213 15.7587
PERA/EiJ f 15.4909 0.1852 15.8544 15.1274
PERA/EiJ m 15.8375 0.2172 16.2638 15.4112
PL/J f 16.0125 0.1536 16.3139 15.7111
PL/J m 16.06 0.1943 16.4413 15.6787
PWK/PhJ f 16.6154 0.1704 16.9498 16.281
PWK/PhJ m 14.8833 0.1773 15.2314 14.5353
RF/J f 15.7 0.1943 16.0813 15.3187
RF/J m 15.55 0.1536 15.8514 15.2486
RIIIS/J f 16.0556 0.2048 16.4574 15.6537
RIIIS/J m 15.5667 0.1586 15.878 15.2554
SEA/GnJ f 15.71 0.1943 16.0913 15.3287
SEA/GnJ m 15.1222 0.2048 15.5241 14.7203
SJL/J f 16.0286 0.2322 16.4843 15.5729
SJL/J m 16.0714 0.1642 16.3937 15.7492
SM/J f 16.25 0.1943 16.6313 15.8687
SM/J m 16.75 0.1943 17.1313 16.3687
SPRET/EiJ f 15.0364 0.1852 15.3999 14.6728
SPRET/EiJ m 14.4 0.1852 14.7635 14.0365
SWR/J f 16.6846 0.1704 17.019 16.3502
SWR/J m 16.6909 0.1852 17.0544 16.3274
WSB/EiJ f 16.5727 0.1852 16.9362 16.2092
WSB/EiJ m 16.2556 0.2048 16.6574 15.8537


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 15.9274 0.1141 16.1514 15.7034
A/J both 15.245 0.1374 15.5146 14.9754
AKR/J both 15.8961 0.1411 16.1731 15.6191
BALB/cByJ both 16.354 0.0977 16.5457 16.1623
BALB/cJ both 16.5109 0.1657 16.836 16.1858
BTBR T+ Itpr3tf/J both 16.36 0.1374 16.6296 16.0904
BUB/BnJ both 17.0736 0.1272 17.3232 16.824
C3H/HeJ both 16.32 0.1374 16.5896 16.0504
C57BL/10J both 14.6105 0.1038 14.8143 14.4067
C57BL/6J both 15.7227 0.131 15.9798 15.4657
C57BLKS/J both 15.23 0.1374 15.4996 14.9604
C57BR/cdJ both 16.15 0.1315 16.4081 15.8919
C57L/J both 15.8367 0.119 16.0701 15.6032
C58/J both 16.6533 0.1411 16.9303 16.3764
CAST/EiJ both 16.1405 0.1282 16.3922 15.8889
CBA/J both 15.4406 0.1411 15.7175 15.1636
CE/J both 15.8216 0.138 16.0925 15.5508
CZECHII/EiJ both 16.5318 0.131 16.7889 16.2748
DBA/1J both 13.7188 0.1238 13.9617 13.4759
DBA/2J both 14.1019 0.1292 14.3555 13.8484
FVB/NJ both 15.6625 0.1254 15.9086 15.4164
I/LnJ both 15.2069 0.1183 15.4391 14.9747
JF1/MsJ both 16.2802 0.1173 16.5104 16.05
KK/HlJ both 14.549 0.1238 14.7919 14.3061
LP/J both 16.2083 0.1254 16.4544 15.9622
MA/MyJ both 16.1346 0.123 16.3759 15.8933
MOLF/EiJ both 16.4413 0.1164 16.6697 16.2129
MSM/MsJ both 15.9091 0.131 16.1661 15.652
NOD/ShiLtJ both 16.755 0.1374 17.0246 16.4854
NON/ShiLtJ both 16.41 0.1374 16.6796 16.1404
NZB/BlNJ both 15.6931 0.1354 15.9589 15.4272
NZW/LacJ both 16.1867 0.1315 16.4448 15.9286
PERA/EiJ both 15.6642 0.1427 15.9443 15.3841
PL/J both 16.0363 0.1238 16.2793 15.7932
PWK/PhJ both 15.7494 0.123 15.9907 15.508
RF/J both 15.625 0.1238 15.868 15.382
RIIIS/J both 15.8111 0.1295 16.0653 15.5569
SEA/GnJ both 15.4161 0.1411 15.6931 15.1391
SJL/J both 16.05 0.1422 16.3291 15.7709
SM/J both 16.5 0.1374 16.7696 16.2304
SPRET/EiJ both 14.7182 0.131 14.9752 14.4611
SWR/J both 16.6878 0.1258 16.9347 16.4408
WSB/EiJ both 16.4141 0.1381 16.6851 16.1432




  GWAS USING LINEAR MIXED MODELS