Project measure / variable:   Nadeau2   TG

ID, description, units MPD:53042   TG   triglycerides (plasma TG, 16h fast)   [mmol/L]  
high-fat high-sucrose diet study
Data set, strains Nadeau2   B6.A consomic w/par   24 strains     sex: m     age: 21wks
Procedure lipid profile
Ontology mappings

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  STRAIN COMPARISON PLOT
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Nadeau2 - triglycerides (plasma TG, 16h fast)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested24 strains
Mean of the strain means0.751   mmol/L
Median of the strain means0.730   mmol/L
SD of the strain means± 0.170
Coefficient of variation (CV)0.226
Min–max range of strain means0.561   –   1.36   mmol/L
Mean sample size per strain39.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 23 25.9528 1.1284 19.1859 < 0.0001
Residuals 954 56.1077 0.0588


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J m 0.717 0.266   95 0.0273 0.371 0.26, 1.54 -0.2
B6.A-Chr1 m 0.571 0.166   27 0.032 0.291 0.29, 0.99 -1.06
B6.A-Chr10 m 0.874 0.264   76 0.0303 0.303 0.33, 1.7 0.72
B6.A-Chr11 m 0.858 0.224   36 0.0373 0.261 0.33, 1.35 0.63
B6.A-Chr12 m 0.663 0.19   35 0.0321 0.287 0.36, 1.12 -0.52
B6.A-Chr13 m 0.57 0.133   27 0.0255 0.233 0.34, 0.8 -1.07
B6.A-Chr14 m 0.737 0.196   34 0.0336 0.266 0.43, 1.21 -0.08
B6.A-Chr15 m 0.561 0.143   27 0.0276 0.255 0.33, 1.0 -1.12
B6.A-Chr16 m 0.612 0.146   37 0.024 0.238 0.3, 0.97 -0.82
B6.A-Chr17 m 0.733 0.245   36 0.0408 0.334 0.43, 1.23 -0.11
B6.A-Chr18 m 0.758 0.266   38 0.0431 0.35 0.4, 1.37 0.04
B6.A-Chr19 m 0.903 0.357   34 0.0613 0.396 0.42, 1.93 0.89
B6.A-Chr2 m 0.979 0.21   34 0.036 0.215 0.62, 1.49 1.34
B6.A-Chr3 m 0.76 0.254   40 0.0402 0.334 0.34, 1.6 0.05
B6.A-Chr4 m 0.823 0.266   38 0.0431 0.323 0.31, 1.52 0.42
B6.A-Chr5 m 0.773 0.235   38 0.0381 0.304 0.44, 1.43 0.13
B6.A-Chr6 m 1.36 0.358   38 0.0581 0.263 0.66, 2.31 3.59
B6.A-Chr7 m 0.699 0.246   34 0.0421 0.351 0.24, 1.23 -0.31
B6.A-Chr8 m 0.762 0.268   34 0.0459 0.352 0.32, 1.38 0.06
B6.A-Chr9 m 0.684 0.261   33 0.0454 0.381 0.33, 1.38 -0.4
B6.A-ChrX m 0.727 0.243   36 0.0405 0.334 0.44, 1.41 -0.14
B6.A-ChrY m 0.675 0.216   31 0.0389 0.321 0.3, 1.12 -0.45
B6.A-mt m 0.657 0.188   24 0.0384 0.286 0.38, 1.06 -0.56
C57BL/6J m 0.577 0.215   96 0.022 0.373 0.27, 1.71 -1.03


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 0.7167 0.0249 0.7656 0.6679
B6.A-Chr1 m 0.5707 0.0467 0.6623 0.4791
B6.A-Chr10 m 0.8736 0.0278 0.9281 0.819
B6.A-Chr11 m 0.8581 0.0404 0.9374 0.7787
B6.A-Chr12 m 0.6626 0.041 0.743 0.5821
B6.A-Chr13 m 0.5696 0.0467 0.6612 0.478
B6.A-Chr14 m 0.7371 0.0416 0.8187 0.6554
B6.A-Chr15 m 0.5615 0.0467 0.6531 0.4699
B6.A-Chr16 m 0.6116 0.0399 0.6899 0.5334
B6.A-Chr17 m 0.7328 0.0404 0.8121 0.6535
B6.A-Chr18 m 0.7582 0.0393 0.8354 0.681
B6.A-Chr19 m 0.9026 0.0416 0.9843 0.821
B6.A-Chr2 m 0.9788 0.0416 1.0604 0.8972
B6.A-Chr3 m 0.7602 0.0383 0.8355 0.685
B6.A-Chr4 m 0.8232 0.0393 0.9004 0.746
B6.A-Chr5 m 0.7729 0.0393 0.8501 0.6957
B6.A-Chr6 m 1.3624 0.0393 1.4396 1.2852
B6.A-Chr7 m 0.6988 0.0416 0.7804 0.6172
B6.A-Chr8 m 0.7621 0.0416 0.8437 0.6804
B6.A-Chr9 m 0.6836 0.0422 0.7665 0.6008
B6.A-ChrX m 0.7267 0.0404 0.806 0.6473
B6.A-ChrY m 0.6745 0.0436 0.76 0.589
B6.A-mt m 0.6575 0.0495 0.7546 0.5604
C57BL/6J m 0.5769 0.0248 0.6254 0.5283




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA