Project measure / variable:   HMDPpheno10   hypoxanthine

ID, description, units MPD:50505   hypoxanthine   hypoxanthine (16h fast), relative abundance    
Data set, strains HMDPpheno10   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno10 - hypoxanthine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means753496   None
Median of the strain means760581   None
SD of the strain means± 97103
Coefficient of variation (CV)0.129
Min–max range of strain means448794   –   980499   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 344854099797.348 16421623799.8737 1.697 0.0828
Residuals 34 329020326294.174 9677068420.4169


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 822775.0 0.0   1   0.0 0.0 822775.0, 822775.0 0.71
A/J m 703625.0 81177.0   2   57401.0 0.115 646225.0, 761026.0 -0.51
AKR/J m 588129.0 0.0   1   0.0 0.0 588129.0, 588129.0 -1.7
AXB10/PgnJ m 627425.0 0.0   1   0.0 0.0 627425.0, 627425.0 -1.3
AXB12/PgnJ m 594592.0 0.0   1   0.0 0.0 594592.0, 594592.0 -1.64
AXB13/PgnJ m 708516.0 0.0   1   0.0 0.0 708516.0, 708516.0 -0.46
AXB15/PgnJ m 727321.0 0.0   1   0.0 0.0 727321.0, 727321.0 -0.27
AXB19a/PgnJ m 846127.0 0.0   1   0.0 0.0 846127.0, 846127.0 0.95
AXB19b/PgnJ m 781520.0 111902.0   2   79127.0 0.143 702393.0, 860646.0 0.29
AXB19/PgnJ m 834783.0 0.0   1   0.0 0.0 834783.0, 834783.0 0.84
AXB1/PgnJ m 789482.0 0.0   1   0.0 0.0 789482.0, 789482.0 0.37
AXB23/PgnJ m 738427.0 0.0   1   0.0 0.0 738427.0, 738427.0 -0.16
AXB24/PgnJ m 534971.0 99729.0   2   70519.0 0.186 464452.0, 605490.0 -2.25
AXB2/PgnJ m 738758.0 0.0   1   0.0 0.0 738758.0, 738758.0 -0.15
AXB4/PgnJ m 878579.0 0.0   1   0.0 0.0 878579.0, 878579.0 1.29
AXB5/PgnJ m 637867.0 0.0   1   0.0 0.0 637867.0, 637867.0 -1.19
AXB6/PgnJ m 847344.0 0.0   1   0.0 0.0 847344.0, 847344.0 0.97
AXB8/PgnJ m 657938.0 0.0   1   0.0 0.0 657938.0, 657938.0 -0.98
BALB/cJ m 846632.0 72761.0   3 42009.0 0.0859 778594.0, 923340.0 0.96
BTBR T+ Itpr3tf/J m 721854.0 0.0   1   0.0 0.0 721854.0, 721854.0 -0.33
BUB/BnJ m 707752.0 0.0   1   0.0 0.0 707752.0, 707752.0 -0.47
BXA11/PgnJ m 497770.0 0.0   1   0.0 0.0 497770.0, 497770.0 -2.63
BXA12/PgnJ m 448794.0 0.0   1   0.0 0.0 448794.0, 448794.0 -3.14
BXA13/PgnJ m 743107.0 0.0   1   0.0 0.0 743107.0, 743107.0 -0.11
BXA14/PgnJ m 532500.0 0.0   1   0.0 0.0 532500.0, 532500.0 -2.28
BXA16/PgnJ m 599697.0 29083.0   2   20565.0 0.0485 579133.0, 620262.0 -1.58
BXA1/PgnJ m 925356.0 0.0   1   0.0 0.0 925356.0, 925356.0 1.77
BXA24/PgnJ m 761269.0 0.0   1   0.0 0.0 761269.0, 761269.0 0.08
BXA25/PgnJ m 660741.0 0.0   1   0.0 0.0 660741.0, 660741.0 -0.96
BXA26/PgnJ m 707753.0 0.0   1   0.0 0.0 707753.0, 707753.0 -0.47
BXA2/PgnJ m 626763.0 0.0   1   0.0 0.0 626763.0, 626763.0 -1.31
BXA4/PgnJ m 545182.0 0.0   1   0.0 0.0 545182.0, 545182.0 -2.15
BXA7/PgnJ m 579870.0 0.0   1   0.0 0.0 579870.0, 579870.0 -1.79
BXA8/PgnJ m 616086.0 0.0   1   0.0 0.0 616086.0, 616086.0 -1.42
BXD11/TyJ m 759893.0 0.0   1   0.0 0.0 759893.0, 759893.0 0.07
BXD12/TyJ m 769381.0 0.0   1   0.0 0.0 769381.0, 769381.0 0.16
BXD13/TyJ m 782843.0 0.0   1   0.0 0.0 782843.0, 782843.0 0.3
BXD14/TyJ m 891130.0 0.0   1   0.0 0.0 891130.0, 891130.0 1.42
BXD15/TyJ m 754785.0 0.0   1   0.0 0.0 754785.0, 754785.0 0.01
BXD18/TyJ m 749638.0 0.0   1   0.0 0.0 749638.0, 749638.0 -0.04
BXD19/TyJ m 795866.0 67020.0   2   47391.0 0.0842 748476.0, 843257.0 0.44
BXD1/TyJ m 766895.0 0.0   1   0.0 0.0 766895.0, 766895.0 0.14
BXD20/TyJ m 804830.0 0.0   1   0.0 0.0 804830.0, 804830.0 0.53
BXD21/TyJ m 647597.0 0.0   1   0.0 0.0 647597.0, 647597.0 -1.09
BXD22/TyJ m 980499.0 0.0   1   0.0 0.0 980499.0, 980499.0 2.34
BXD24/TyJ m 736903.0 0.0   1   0.0 0.0 736903.0, 736903.0 -0.17
BXD24/TyJ-Cep290rd16/J m 829554.0 0.0   1   0.0 0.0 829554.0, 829554.0 0.78
BXD28/TyJ m 755619.0 111446.0   2   78805.0 0.147 676815.0, 834424.0 0.02
BXD29-Tlr4lps-2J/J m 821858.0 0.0   1   0.0 0.0 821858.0, 821858.0 0.7
BXD2/TyJ m 641724.0 0.0   1   0.0 0.0 641724.0, 641724.0 -1.15
BXD32/TyJ m 724252.0 0.0   1   0.0 0.0 724252.0, 724252.0 -0.3
BXD33/TyJ m 811124.0 0.0   1   0.0 0.0 811124.0, 811124.0 0.59
BXD34/TyJ m 817648.0 0.0   1   0.0 0.0 817648.0, 817648.0 0.66
BXD36/TyJ m 769203.0 0.0   1   0.0 0.0 769203.0, 769203.0 0.16
BXD38/TyJ m 758353.0 0.0   1   0.0 0.0 758353.0, 758353.0 0.05
BXD39/TyJ m 705616.0 0.0   1   0.0 0.0 705616.0, 705616.0 -0.49
BXD40/TyJ m 827133.0 0.0   1   0.0 0.0 827133.0, 827133.0 0.76
BXD42/TyJ m 763356.0 0.0   1   0.0 0.0 763356.0, 763356.0 0.1
BXD5/TyJ m 805713.0 0.0   1   0.0 0.0 805713.0, 805713.0 0.54
BXD6/TyJ m 712615.0 0.0   1   0.0 0.0 712615.0, 712615.0 -0.42
BXD8/TyJ m 597777.0 0.0   1   0.0 0.0 597777.0, 597777.0 -1.6
BXD9/TyJ m 736346.0 0.0   1   0.0 0.0 736346.0, 736346.0 -0.18
BXH10/TyJ m 849385.0 0.0   1   0.0 0.0 849385.0, 849385.0 0.99
BXH19/TyJ m 656742.0 0.0   1   0.0 0.0 656742.0, 656742.0 -1.0
BXH20/KccJ m 801053.0 0.0   1   0.0 0.0 801053.0, 801053.0 0.49
BXH22/KccJ m 798136.0 0.0   1   0.0 0.0 798136.0, 798136.0 0.46
BXH2/TyJ m 805038.0 0.0   1   0.0 0.0 805038.0, 805038.0 0.53
BXH4/TyJ m 806125.0 55352.0   2   39140.0 0.0687 766985.0, 845265.0 0.54
BXH6/TyJ m 736453.0 0.0   1   0.0 0.0 736453.0, 736453.0 -0.18
BXH7/TyJ m 709881.0 0.0   1   0.0 0.0 709881.0, 709881.0 -0.45
BXH8/TyJ m 780639.0 0.0   1   0.0 0.0 780639.0, 780639.0 0.28
BXH9/TyJ m 703457.0 0.0   1   0.0 0.0 703457.0, 703457.0 -0.52
C3H/HeJ m 848629.0 18200.0   2   12870.0 0.0214 835759.0, 861498.0 0.98
C57BL/6J m 807740.0 168961.0   5 75562.0 0.209 655478.0, 1092145.0 0.56
C57L/J m 792807.0 0.0   1   0.0 0.0 792807.0, 792807.0 0.4
C58/J m 822182.0 0.0   1   0.0 0.0 822182.0, 822182.0 0.71
CAST/EiJ m 806919.0 0.0   1   0.0 0.0 806919.0, 806919.0 0.55
CBA/J m 757397.0 0.0   1   0.0 0.0 757397.0, 757397.0 0.04
CE/J m 686563.0 0.0   1   0.0 0.0 686563.0, 686563.0 -0.69
CXB11/HiAJ m 789112.0 114091.0   2   80675.0 0.145 708438.0, 869787.0 0.37
CXB12/HiAJ m 710235.0 11624.0   2   8220.0 0.0164 702015.0, 718455.0 -0.45
CXB13/HiAJ m 818707.0 115305.0   3 66571.0 0.141 731851.0, 949526.0 0.67
CXB1/ByJ m 732190.0 61457.0   3 35482.0 0.0839 669858.0, 792733.0 -0.22
CXB2/ByJ m 856884.0 146146.0   3 84378.0 0.171 688195.0, 945334.0 1.06
CXB3/ByJ m 719503.0 119167.0   2   84264.0 0.166 635240.0, 803767.0 -0.35
CXB4/ByJ m 654506.0 30558.0   2   21608.0 0.0467 632898.0, 676113.0 -1.02
CXB6/ByJ m 745558.0 5313.0   3 3067.0 0.00713 740440.0, 751046.0 -0.08
CXB7/ByJ m 780619.0 46262.0   2   32712.0 0.0593 747907.0, 813331.0 0.28
CXB8/HiAJ m 848999.0 84520.0   3 48798.0 0.0996 774512.0, 940855.0 0.98
CXB9/HiAJ m 728042.0 125108.0   3 72231.0 0.172 583580.0, 800329.0 -0.26
DBA/2J m 850786.0 19097.0   4 9549.0 0.0224 833835.0, 869610.0 1.0
FVB/NJ m 850272.0 0.0   1   0.0 0.0 850272.0, 850272.0 1.0
I/LnJ m 875107.0 0.0   1   0.0 0.0 875107.0, 875107.0 1.25
KK/HlJ m 749236.0 0.0   1   0.0 0.0 749236.0, 749236.0 -0.04
LG/J m 763113.0 0.0   1   0.0 0.0 763113.0, 763113.0 0.1
LP/J m 867805.0 0.0   1   0.0 0.0 867805.0, 867805.0 1.18
MA/MyJ m 716775.0 0.0   1   0.0 0.0 716775.0, 716775.0 -0.38
NOD/ShiLtJ m 863926.0 0.0   1   0.0 0.0 863926.0, 863926.0 1.14
NON/ShiLtJ m 884984.0 0.0   1   0.0 0.0 884984.0, 884984.0 1.35
NZW/LacJ m 704779.0 0.0   1   0.0 0.0 704779.0, 704779.0 -0.5
PL/J m 884894.0 0.0   1   0.0 0.0 884894.0, 884894.0 1.35
RIIIS/J m 738742.0 0.0   1   0.0 0.0 738742.0, 738742.0 -0.15
SEA/GnJ m 839215.0 0.0   1   0.0 0.0 839215.0, 839215.0 0.88
SJL/J m 839697.0 0.0   1   0.0 0.0 839697.0, 839697.0 0.89
SM/J m 895782.0 0.0   1   0.0 0.0 895782.0, 895782.0 1.47
SWR/J m 894533.0 0.0   1   0.0 0.0 894533.0, 894533.0 1.45


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 703625.45 69559.5731 844987.5105 562263.3895
AXB19b/PgnJ m 781519.5 69559.5731 922881.5605 640157.4395
AXB24/PgnJ m 534970.85 69559.5731 676332.9105 393608.7895
BALB/cJ m 846632.4 56795.1536 962054.0391 731210.7609
BXA16/PgnJ m 599697.45 69559.5731 741059.5105 458335.3895
BXD19/TyJ m 795866.35 69559.5731 937228.4105 654504.2895
BXD28/TyJ m 755619.35 69559.5731 896981.4105 614257.2895
BXH4/TyJ m 806124.95 69559.5731 947487.0105 664762.8895
C3H/HeJ m 848628.85 69559.5731 989990.9105 707266.7895
C57BL/6J m 807739.66 43993.3368 897144.8772 718334.4428
CXB11/HiAJ m 789112.25 69559.5731 930474.3105 647750.1895
CXB12/HiAJ m 710235.0 69559.5731 851597.0605 568872.9395
CXB13/HiAJ m 818706.9667 56795.1536 934128.6057 703285.3276
CXB1/ByJ m 732190.1333 56795.1536 847611.7724 616768.4943
CXB2/ByJ m 856883.9333 56795.1536 972305.5724 741462.2943
CXB3/ByJ m 719503.15 69559.5731 860865.2105 578141.0895
CXB4/ByJ m 654505.75 69559.5731 795867.8105 513143.6895
CXB6/ByJ m 745558.2333 56795.1536 860979.8724 630136.5943
CXB7/ByJ m 780618.85 69559.5731 921980.9105 639256.7895
CXB8/HiAJ m 848999.0333 56795.1536 964420.6724 733577.3943
CXB9/HiAJ m 728042.2667 56795.1536 843463.9057 612620.6276
DBA/2J m 850786.075 49186.0458 950744.1466 750828.0034




  GWAS USING LINEAR MIXED MODELS