Project measure / variable:   Hadsell1   pups_d8

ID, description, units MPD:49403   pups_d8   number of cross-fostered pups that survived to day 8 (max=10)   [n]  
Data set, strains Hadsell1   inbred   31 strains     sex: f     age: 14-18wks
Procedure colony observation
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  STRAIN COMPARISON PLOT
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Hadsell1 - number of cross-fostered pups that survived to day 8 (max=10)



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested31 strains
Mean of the strain means9.00   n
Median of the strain means9.67   n
SD of the strain means± 1.17
Coefficient of variation (CV)0.130
Min–max range of strain means6.60   –   10.0   n
Mean sample size per strain9.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 30 437.8245 14.5942 2.6267 < 0.0001
Residuals 276 1533.4719 5.5561


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 9.8 0.422   10 0.133 0.043 9.0, 10.0 0.69
A/J f 6.61 3.71   18 0.875 0.562 -2.05
AKR/J f 9.88 0.354   8 0.125 0.0358 9.0, 10.0 0.76
BALB/cByJ f 9.7 0.675   10 0.213 0.0696 8.0, 10.0 0.6
BTBR T+ Itpr3tf/J f 9.92 0.289   12 0.0833 0.0291 9.0, 10.0 0.79
BUB/BnJ f 9.29 1.5   7 0.565 0.161 6.0, 10.0 0.25
C3H/HeJ f 9.75 0.463   8 0.164 0.0475 9.0, 10.0 0.64
C57BL/6J f 9.75 0.707   8 0.25 0.0725 8.0, 10.0 0.64
C57L/J f 9.14 0.69   7 0.261 0.0755 8.0, 10.0 0.12
C58/J f 10.0 0.0   7 0.0 0.0 10.0, 10.0 0.86
CBA/J f 8.58 3.09   12 0.892 0.36 -0.36
CE/J f 9.67 0.5   9 0.167 0.0517 9.0, 10.0 0.58
CZECHII/EiJ f 7.4 4.22   5 1.89 0.57 -1.37
DBA/1J f 9.62 0.744   8 0.263 0.0773 8.0, 10.0 0.53
DBA/2J f 9.89 0.333   9 0.111 0.0337 9.0, 10.0 0.76
FVB/NJ f 10.0 0.0   9 0.0 0.0 10.0, 10.0 0.86
I/LnJ f 9.67 0.5   9 0.167 0.0517 9.0, 10.0 0.58
KK/HlJ f 8.65 3.28   17 0.795 0.379 -0.3
LG/J f 10.0 0.0   9 0.0 0.0 10.0, 10.0 0.86
LP/J f 6.6 3.97   5 1.78 0.602 -2.05
MA/MyJ f 6.73 3.72   11 1.12 0.553 -1.94
NOD/ShiLtJ f 9.7 0.483   10 0.153 0.0498 9.0, 10.0 0.6
NON/ShiLtJ f 9.83 0.389   12 0.112 0.0396 9.0, 10.0 0.71
NZW/LacJ f 8.5 3.41   14 0.912 0.402 -0.43
PL/J f 6.69 4.09   13 1.13 0.611 -1.98
QSi5 f 9.92 0.289   12 0.0833 0.0291 9.0, 10.0 0.79
RIIIS/J f 7.25 3.87   16 0.968 0.534 -1.5
SEA/GnJ f 9.38 0.744   8 0.263 0.0794 8.0, 10.0 0.33
SJL/J f 8.56 2.19   9 0.729 0.255 3.0, 10.0 -0.37
SM/J f 10.0 0.0   6 0.0 0.0 10.0, 10.0 0.86
SWR/J f 8.44 3.32   9 1.11 0.393 -0.48


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 9.8 0.7454 11.2674 8.3326
A/J f 6.6111 0.5556 7.7048 5.5174
AKR/J f 9.875 0.8334 11.5156 8.2344
BALB/cByJ f 9.7 0.7454 11.1674 8.2326
BTBR T+ Itpr3tf/J f 9.9167 0.6804 11.2562 8.5771
BUB/BnJ f 9.2857 0.8909 11.0396 7.5319
C3H/HeJ f 9.75 0.8334 11.3906 8.1094
C57BL/6J f 9.75 0.8334 11.3906 8.1094
C57L/J f 9.1429 0.8909 10.8967 7.389
C58/J f 10.0 0.8909 11.7538 8.2462
CBA/J f 8.5833 0.6804 9.9229 7.2438
CE/J f 9.6667 0.7857 11.2134 8.1199
CZECHII/EiJ f 7.4 1.0541 9.4752 5.3248
DBA/1J f 9.625 0.8334 11.2656 7.9844
DBA/2J f 9.8889 0.7857 11.4356 8.3421
FVB/NJ f 10.0 0.7857 11.5467 8.4533
I/LnJ f 9.6667 0.7857 11.2134 8.1199
KK/HlJ f 8.6471 0.5717 9.7725 7.5216
LG/J f 10.0 0.7857 11.5467 8.4533
LP/J f 6.6 1.0541 8.6752 4.5248
MA/MyJ f 6.7273 0.7107 8.1264 5.3282
NOD/ShiLtJ f 9.7 0.7454 11.1674 8.2326
NON/ShiLtJ f 9.8333 0.6804 11.1729 8.4938
NZW/LacJ f 8.5 0.63 9.7402 7.2598
PL/J f 6.6923 0.6537 7.9793 5.4053
QSi5 f 9.9167 0.6804 11.2562 8.5771
RIIIS/J f 7.25 0.5893 8.4101 6.0899
SEA/GnJ f 9.375 0.8334 11.0156 7.7344
SJL/J f 8.5556 0.7857 10.1023 7.0088
SM/J f 10.0 0.9623 11.8944 8.1056
SWR/J f 8.4444 0.7857 9.9912 6.8977




  GWAS USING LINEAR MIXED MODELS