Project measure / variable:   HMDPpheno5   MCHC

ID, description, units MPD:48967   MCHC   mean RBC corpuscular hemoglobin concentration (MCHC)   [g/dL]  
Data set, strains HMDPpheno5   HMDP w/par   83 strains     sex: m     age: 16wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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HMDPpheno5 - mean RBC corpuscular hemoglobin concentration (MCHC)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested83 strains
Mean of the strain means34.2   g/dL
Median of the strain means34.8   g/dL
SD of the strain means± 3.10
Coefficient of variation (CV)0.0905
Min–max range of strain means28.6   –   43.0   g/dL
Mean sample size per strain2.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 82 2065.6085 25.1903 7.0138 < 0.0001
Residuals 150 538.7347 3.5916


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J m 32.0 0.212   2   0.15 0.00664 31.8, 32.1 -0.72
AXB10/PgnJ m 35.8 0.212   2   0.15 0.00593 35.6, 35.9 0.51
AXB12/PgnJ m 32.5 1.06   2   0.75 0.0327 31.7, 33.2 -0.56
AXB13/PgnJ m 31.2 0.354   2   0.25 0.0113 31.0, 31.5 -0.98
AXB15/PgnJ m 37.8 0.778   2   0.55 0.0205 37.3, 38.4 1.15
AXB19b/PgnJ m 37.7 2.02   4 1.01 0.0537 35.4, 39.4 1.12
AXB19/PgnJ m 36.6 0.354   2   0.25 0.00965 36.4, 36.9 0.77
AXB23/PgnJ m 31.5 1.41   2   1.0 0.0449 30.5, 32.5 -0.88
AXB2/PgnJ m 34.0 3.61   2   2.55 0.106 31.5, 36.6 -0.07
AXB4/PgnJ m 38.2 1.41   2   1.0 0.037 37.2, 39.2 1.28
AXB5/PgnJ m 30.6 0.636   2   0.45 0.0208 30.2, 31.1 -1.17
AXB6/PgnJ m 31.1 0.778   2   0.55 0.025 30.6, 31.7 -1.01
AXB8/PgnJ m 36.7 0.283   2   0.2 0.00771 36.5, 36.9 0.8
BALB/cJ m 30.9 0.0707   2   0.05 0.00229 30.8, 30.9 -1.07
BTBR T+ Itpr3tf/J m 31.0 0.849   2   0.6 0.0274 30.4, 31.6 -1.04
BXA11/PgnJ m 31.1 0.566   2   0.4 0.0182 30.7, 31.5 -1.01
BXA12/PgnJ m 35.5 1.63   2   1.15 0.0457 34.4, 36.7 0.41
BXA13/PgnJ m 31.4 0.0707   2   0.05 0.00225 31.4, 31.5 -0.91
BXA14/PgnJ m 31.5 1.56   2   1.1 0.0494 30.4, 32.6 -0.88
BXA16/PgnJ m 38.3 2.01   3 1.16 0.0524 36.9, 40.6 1.32
BXA24/PgnJ m 35.7 0.0707   2   0.05 0.00198 35.6, 35.7 0.48
BXA25/PgnJ m 38.9 5.09   2   3.6 0.131 35.3, 42.5 1.51
BXA26/PgnJ m 30.7 0.707   2   0.5 0.023 30.2, 31.2 -1.14
BXA2/PgnJ m 36.0 0.919   2   0.65 0.0256 35.3, 36.6 0.57
BXA4/PgnJ m 33.1 2.55   2   1.8 0.0769 31.3, 34.9 -0.36
BXA7/PgnJ m 32.7 0.0707   2   0.05 0.00217 32.6, 32.7 -0.49
BXA8/PgnJ m 36.0 0.141   2   0.1 0.00393 35.9, 36.1 0.57
BXD12/TyJ m 30.4 0.495   2   0.35 0.0163 30.0, 30.7 -1.23
BXD13/TyJ m 32.2 0.849   2   0.6 0.0264 31.6, 32.8 -0.65
BXD14/TyJ m 33.0 2.47   2   1.75 0.0749 31.3, 34.8 -0.4
BXD15/TyJ m 31.7 0.0   2   0.0 0.0 31.7, 31.7 -0.81
BXD19/TyJ m 33.1 2.19   4 1.09 0.0661 30.9, 35.4 -0.36
BXD20/TyJ m 36.1 0.566   2   0.4 0.0157 35.7, 36.5 0.61
BXD22/TyJ m 43.0 10.3   2   7.3 0.24 35.7, 50.3 2.83
BXD24/TyJ m 37.4 6.79   2   4.8 0.182 32.6, 42.2 1.02
BXD24/TyJ-Cep290rd16/J m 32.6 0.424   2   0.3 0.013 32.3, 32.9 -0.52
BXD28/TyJ m 31.8 0.424   2   0.3 0.0133 31.5, 32.1 -0.78
BXD29-Tlr4lps-2J/J m 36.1 0.212   2   0.15 0.00587 36.0, 36.3 0.61
BXD2/TyJ m 38.7 3.11   2   2.2 0.0804 36.5, 40.9 1.44
BXD33/TyJ m 36.4 0.354   2   0.25 0.00973 36.1, 36.6 0.7
BXD34/TyJ m 31.2 1.41   2   1.0 0.0453 30.2, 32.2 -0.98
BXD40/TyJ m 40.9 6.15   2   4.35 0.151 36.5, 45.2 2.15
BXD42/TyJ m 31.3 0.0   2   0.0 0.0 31.3, 31.3 -0.94
BXD5/TyJ m 32.2 0.919   2   0.65 0.0285 31.6, 32.9 -0.65
BXD6/TyJ m 36.4 0.424   2   0.3 0.0117 36.1, 36.7 0.7
BXD8/TyJ m 36.4 0.141   2   0.1 0.00389 36.3, 36.5 0.7
BXD9/TyJ m 31.1 0.566   2   0.4 0.0182 30.7, 31.5 -1.01
BXH19/TyJ m 36.7 0.424   2   0.3 0.0116 36.4, 37.0 0.8
BXH20/KccJ m 36.9 0.424   2   0.3 0.0115 36.6, 37.2 0.86
BXH2/TyJ m 36.4 1.98   2   1.4 0.0544 35.0, 37.8 0.7
BXH4/TyJ m 31.4 1.27   4 0.637 0.0405 30.5, 33.3 -0.91
BXH6/TyJ m 35.6 5.37   2   3.8 0.151 31.8, 39.4 0.44
BXH7/TyJ m 38.9 2.4   2   1.7 0.0618 37.2, 40.6 1.51
BXH8/TyJ m 30.5 0.212   2   0.15 0.00694 30.4, 30.7 -1.2
BXH9/TyJ m 31.6 0.354   2   0.25 0.0112 31.4, 31.9 -0.85
C57BL/6J m 41.2 8.1   3 4.68 0.196 35.5, 50.5 2.25
C57L/J m 35.4 0.495   2   0.35 0.014 35.0, 35.7 0.38
C58/J m 35.3 0.99   2   0.7 0.028 34.6, 36.0 0.35
CAST/EiJ m 28.6 0.495   2   0.35 0.0173 28.3, 29.0 -1.82
CE/J m 37.8 2.26   2   1.6 0.0599 36.2, 39.4 1.15
CXB11/HiAJ m 35.5 0.589   8 0.208 0.0166 34.5, 36.5 0.41
CXB12/HiAJ m 30.4 0.94   8 0.332 0.0309 29.4, 32.2 -1.23
CXB13/HiAJ m 30.5 0.721   8 0.255 0.0236 29.7, 32.1 -1.2
CXB1/ByJ m 36.7 0.961   8 0.34 0.0262 35.1, 38.1 0.8
CXB2/ByJ m 36.1 0.873   6 0.357 0.0242 35.2, 37.5 0.61
CXB3/ByJ m 31.0 0.887   9 0.296 0.0287 29.7, 32.3 -1.04
CXB4/ByJ m 35.2 0.55   8 0.195 0.0156 34.5, 36.1 0.31
CXB6/ByJ m 35.9 0.707   7 0.267 0.0197 35.1, 37.0 0.54
CXB7/ByJ m 36.5 0.519   7 0.196 0.0142 35.5, 37.0 0.73
CXB8/HiAJ m 31.0 0.541   5 0.242 0.0175 30.5, 31.8 -1.04
CXB9/HiAJ m 35.0 0.907   7 0.343 0.0259 33.7, 36.2 0.25
DBA/2J m 30.8 0.919   2   0.65 0.0299 30.1, 31.4 -1.11
FVB/NJ m 30.8 0.212   2   0.15 0.0069 30.6, 30.9 -1.11
KK/HlJ m 38.5 0.354   2   0.25 0.00917 38.3, 38.8 1.38
LG/J m 31.4 0.636   2   0.45 0.0203 30.9, 31.8 -0.91
LP/J m 30.2 0.424   2   0.3 0.014 29.9, 30.5 -1.3
MA/MyJ m 36.0 0.212   2   0.15 0.0059 35.8, 36.1 0.57
NZW/LacJ m 31.5 1.56   2   1.1 0.0494 30.4, 32.6 -0.88
PL/J m 32.9 1.27   2   0.9 0.0387 32.0, 33.8 -0.43
RIIIS/J m 36.0 0.0707   2   0.05 0.00197 35.9, 36.0 0.57
SEA/GnJ m 30.9 1.7   2   1.2 0.0549 29.7, 32.1 -1.07
SJL/J m 36.2 0.636   2   0.45 0.0176 35.7, 36.6 0.64
SM/J m 34.8 0.283   2   0.2 0.00813 34.6, 35.0 0.19


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 31.95 1.3401 34.5978 29.3022
AXB10/PgnJ m 35.75 1.3401 38.3978 33.1022
AXB12/PgnJ m 32.45 1.3401 35.0978 29.8022
AXB13/PgnJ m 31.25 1.3401 33.8978 28.6022
AXB15/PgnJ m 37.85 1.3401 40.4978 35.2022
AXB19b/PgnJ m 37.7 0.9476 39.5723 35.8277
AXB19/PgnJ m 36.65 1.3401 39.2978 34.0022
AXB23/PgnJ m 31.5 1.3401 34.1478 28.8522
AXB2/PgnJ m 34.05 1.3401 36.6978 31.4022
AXB4/PgnJ m 38.2 1.3401 40.8478 35.5522
AXB5/PgnJ m 30.65 1.3401 33.2978 28.0022
AXB6/PgnJ m 31.15 1.3401 33.7978 28.5022
AXB8/PgnJ m 36.7 1.3401 39.3478 34.0522
BALB/cJ m 30.85 1.3401 33.4978 28.2022
BTBR T+ Itpr3tf/J m 31.0 1.3401 33.6478 28.3522
BXA11/PgnJ m 31.1 1.3401 33.7478 28.4522
BXA12/PgnJ m 35.55 1.3401 38.1978 32.9022
BXA13/PgnJ m 31.45 1.3401 34.0978 28.8022
BXA14/PgnJ m 31.5 1.3401 34.1478 28.8522
BXA16/PgnJ m 38.3 1.0942 40.462 36.138
BXA24/PgnJ m 35.65 1.3401 38.2978 33.0022
BXA25/PgnJ m 38.9 1.3401 41.5478 36.2522
BXA26/PgnJ m 30.7 1.3401 33.3478 28.0522
BXA2/PgnJ m 35.95 1.3401 38.5978 33.3022
BXA4/PgnJ m 33.1 1.3401 35.7478 30.4522
BXA7/PgnJ m 32.65 1.3401 35.2978 30.0022
BXA8/PgnJ m 36.0 1.3401 38.6478 33.3522
BXD12/TyJ m 30.35 1.3401 32.9978 27.7022
BXD13/TyJ m 32.2 1.3401 34.8478 29.5522
BXD14/TyJ m 33.05 1.3401 35.6978 30.4022
BXD15/TyJ m 31.7 1.3401 34.3478 29.0522
BXD19/TyJ m 33.1 0.9476 34.9723 31.2277
BXD20/TyJ m 36.1 1.3401 38.7478 33.4522
BXD22/TyJ m 43.0 1.3401 45.6478 40.3522
BXD24/TyJ m 37.4 1.3401 40.0478 34.7522
BXD24/TyJ-Cep290rd16/J m 32.6 1.3401 35.2478 29.9522
BXD28/TyJ m 31.8 1.3401 34.4478 29.1522
BXD29-Tlr4lps-2J/J m 36.15 1.3401 38.7978 33.5022
BXD2/TyJ m 38.7 1.3401 41.3478 36.0522
BXD33/TyJ m 36.35 1.3401 38.9978 33.7022
BXD34/TyJ m 31.2 1.3401 33.8478 28.5522
BXD40/TyJ m 40.85 1.3401 43.4978 38.2022
BXD42/TyJ m 31.3 1.3401 33.9478 28.6522
BXD5/TyJ m 32.25 1.3401 34.8978 29.6022
BXD6/TyJ m 36.4 1.3401 39.0478 33.7522
BXD8/TyJ m 36.4 1.3401 39.0478 33.7522
BXD9/TyJ m 31.1 1.3401 33.7478 28.4522
BXH19/TyJ m 36.7 1.3401 39.3478 34.0522
BXH20/KccJ m 36.9 1.3401 39.5478 34.2522
BXH2/TyJ m 36.4 1.3401 39.0478 33.7522
BXH4/TyJ m 31.425 0.9476 33.2973 29.5527
BXH6/TyJ m 35.6 1.3401 38.2478 32.9522
BXH7/TyJ m 38.9 1.3401 41.5478 36.2522
BXH8/TyJ m 30.55 1.3401 33.1978 27.9022
BXH9/TyJ m 31.65 1.3401 34.2978 29.0022
C57BL/6J m 41.2333 1.0942 43.3953 39.0714
C57L/J m 35.35 1.3401 37.9978 32.7022
C58/J m 35.3 1.3401 37.9478 32.6522
CAST/EiJ m 28.65 1.3401 31.2978 26.0022
CE/J m 37.8 1.3401 40.4478 35.1522
CXB11/HiAJ m 35.5125 0.67 36.8364 34.1886
CXB12/HiAJ m 30.3625 0.67 31.6864 29.0386
CXB13/HiAJ m 30.55 0.67 31.8739 29.2261
CXB1/ByJ m 36.6625 0.67 37.9864 35.3386
CXB2/ByJ m 36.15 0.7737 37.6787 34.6213
CXB3/ByJ m 30.9667 0.6317 32.2149 29.7185
CXB4/ByJ m 35.1625 0.67 36.4864 33.8386
CXB6/ByJ m 35.9 0.7163 37.3153 34.4847
CXB7/ByJ m 36.4714 0.7163 37.8868 35.0561
CXB8/HiAJ m 30.96 0.8475 32.6346 29.2854
CXB9/HiAJ m 34.9714 0.7163 36.3868 33.5561
DBA/2J m 30.75 1.3401 33.3978 28.1022
FVB/NJ m 30.75 1.3401 33.3978 28.1022
KK/HlJ m 38.55 1.3401 41.1978 35.9022
LG/J m 31.35 1.3401 33.9978 28.7022
LP/J m 30.2 1.3401 32.8478 27.5522
MA/MyJ m 35.95 1.3401 38.5978 33.3022
NZW/LacJ m 31.5 1.3401 34.1478 28.8522
PL/J m 32.9 1.3401 35.5478 30.2522
RIIIS/J m 35.95 1.3401 38.5978 33.3022
SEA/GnJ m 30.9 1.3401 33.5478 28.2522
SJL/J m 36.15 1.3401 38.7978 33.5022
SM/J m 34.8 1.3401 37.4478 32.1522




  GWAS USING LINEAR MIXED MODELS