Project measure / variable:   Chesler4   OF_center_pct

ID, description, units MPD:47006   OF_center_pct   percentage of time in center, 20 min test   [%]  
Data set, strains Chesler4   DO population w/par   9 strains     sex: both     age: 12-16wks
Procedure open field test
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means3.25   % 2.74   %
Median of the strain means3.41   % 2.74   %
SD of the strain means± 1.48 ± 1.12
Coefficient of variation (CV)0.454 0.410
Min–max range of strain means1.21   –   6.17   % 1.49   –   4.84   %
Mean sample size per strain8.0   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 12.9418 12.9418 0.9277 0.336
strain 8 166.2005 20.7751 1.4893 0.1591
sex:strain 8 62.9178 7.8647 0.5638 0.8076
Residuals 393 5482.3246 13.9499


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 2.37 2.4   8 0.848 1.01 0.01, 6.75 -0.6
129S1/SvImJ m 2.81 4.2   8 1.48 1.49 0.01, 12.5 0.07
A/J f 6.17 12.7   8 4.5 2.06 0.01, 36.2 1.98
A/J m 2.74 4.21   8 1.49 1.54 0.01, 12.6 0.0
C57BL/6J f 3.5 1.81   8 0.639 0.517 1.72, 7.01 0.17
C57BL/6J m 3.79 1.57   8 0.556 0.415 1.75, 6.76 0.94
CAST/EiJ f 2.05 0.829   8 0.293 0.404 0.94, 3.58 -0.82
CAST/EiJ m 2.72 2.07   8 0.732 0.761 1.1, 7.35 -0.01
J:DO f 3.41 4.55   144 0.379 1.34 0.01, 42.8 0.11
J:DO m 3.14 2.18   139 0.185 0.693 0.02, 15.0 0.36
NOD/ShiLtJ f 4.52 0.806   8 0.285 0.178 3.17, 5.58 0.86
NOD/ShiLtJ m 4.84 2.32   8 0.821 0.479 2.4, 8.41 1.87
NZO/HlLtJ f 1.21 1.81   8 0.64 1.49 0.01, 5.18 -1.38
NZO/HlLtJ m 1.5 0.817   8 0.289 0.545 0.36, 2.78 -1.1
PWK/PhJ f 2.42 1.25   8 0.441 0.515 1.07, 4.61 -0.56
PWK/PhJ m 1.49 1.01   8 0.358 0.681 0.41, 3.58 -1.11
WSB/EiJ f 3.63 6.32   8 2.24 1.74 0.57, 19.2 0.26
WSB/EiJ m 1.6 0.591   8 0.209 0.369 0.96, 2.8 -1.01


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 2.3688 1.3205 4.9649 0.0
129S1/SvImJ m 2.8138 1.3205 5.4099 0.2176
A/J f 6.17 1.3205 8.7661 3.5739
A/J m 2.7363 1.3205 5.3324 0.1401
C57BL/6J f 3.4962 1.3205 6.0924 0.9001
C57BL/6J m 3.7912 1.3205 6.3874 1.1951
CAST/EiJ f 2.0512 1.3205 4.6474 0.0
CAST/EiJ m 2.72 1.3205 5.3161 0.1239
J:DO f 3.4073 0.3112 4.0192 2.7954
J:DO m 3.143 0.3168 3.7658 2.5202
NOD/ShiLtJ f 4.5237 1.3205 7.1199 1.9276
NOD/ShiLtJ m 4.845 1.3205 7.4411 2.2489
NZO/HlLtJ f 1.2138 1.3205 3.8099 0.0
NZO/HlLtJ m 1.4975 1.3205 4.0936 0.0
PWK/PhJ f 2.42 1.3205 5.0161 0.0
PWK/PhJ m 1.485 1.3205 4.0811 0.0
WSB/EiJ f 3.6287 1.3205 6.2249 1.0326
WSB/EiJ m 1.6025 1.3205 4.1986 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 2.5913 0.9337 4.427 0.7555
A/J both 4.4531 0.9337 6.2889 2.6174
C57BL/6J both 3.6437 0.9337 5.4795 1.808
CAST/EiJ both 2.3856 0.9337 4.2214 0.5499
J:DO both 3.2752 0.2221 3.7117 2.8386
NOD/ShiLtJ both 4.6844 0.9337 6.5201 2.8486
NZO/HlLtJ both 1.3556 0.9337 3.1914 0.0
PWK/PhJ both 1.9525 0.9337 3.7883 0.1167
WSB/EiJ both 2.6156 0.9337 4.4514 0.7799




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA