Project measure / variable:   Donahue18   pup_survival

ID, description, units MPD:44404   pup_survival   percentage of pups that survived to day 3   [%]  
Data set, strains Donahue18   inbred   15 strains     sex: f     age: 6-8wks
Procedure colony observation
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  STRAIN COMPARISON PLOT
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Donahue18 - percentage of pups that survived to day 3



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested15 strains
Mean of the strain means88.2   %
Median of the strain means95.5   %
SD of the strain means± 14.0
Coefficient of variation (CV)0.159
Min–max range of strain means54.2   –   100   %
Mean sample size per strain17.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 14 48357.1681 3454.0834 6.3275 < 0.0001
Residuals 266 145206.3764 545.8886


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 81.1 33.0   18 7.78 0.407 -0.51
A/J f 72.3 35.8   42 5.52 0.495 -1.14
AKR/J f 97.2 6.82   6 2.78 0.0701 83.3, 100.0 0.64
BALB/cByJ f 98.0 6.32   17 1.53 0.0645 75.0, 100.0 0.7
BTBR T+ Itpr3tf/J f 99.2 2.74   11 0.827 0.0277 90.9, 100.0 0.78
C3H/HeJ f 95.5 11.0   18 2.6 0.115 62.5, 100.0 0.52
C57BL/6J f 97.4 5.85   51 0.82 0.0601 80.0, 100.0 0.66
CAST/EiJ f 76.4 36.7   11 11.1 0.48 -0.84
DBA/2J f 93.3 25.8   15 6.67 0.277 0.36
FVB/NJ f 100.0 0.0   19 0.0 0.0 100.0, 100.0 0.84
KK/HlJ f 71.5 25.6   19 5.87 0.358 20.0, 100.0 -1.19
NOD/ShiLtJ f 87.7 33.1   9 11.0 0.377 -0.04
NZW/LacJ f 99.4 2.62   18 0.617 0.0263 88.9, 100.0 0.8
PWD/PhJ f 100.0 0.0   15 0.0 0.0 100.0, 100.0 0.84
WSB/EiJ f 54.2 48.7   12 14.0 0.898 -2.43


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 81.1167 5.507 91.9595 70.2738
A/J f 72.3095 3.6052 79.4079 65.2112
AKR/J f 97.2167 9.5384 115.9971 78.4363
BALB/cByJ f 97.9941 5.6667 109.1513 86.8369
BTBR T+ Itpr3tf/J f 99.1727 7.0446 113.043 85.3025
C3H/HeJ f 95.5333 5.507 106.3762 84.6905
C57BL/6J f 97.4098 3.2717 103.8514 90.9682
CAST/EiJ f 76.3636 7.0446 90.2339 62.4934
DBA/2J f 93.3333 6.0326 105.2111 81.4556
FVB/NJ f 100.0 5.3601 110.5537 89.4463
KK/HlJ f 71.5105 5.3601 82.0642 60.9568
NOD/ShiLtJ f 87.6556 7.7881 102.9897 72.3214
NZW/LacJ f 99.3833 5.507 110.2262 88.5405
PWD/PhJ f 100.0 6.0326 111.8778 88.1222
WSB/EiJ f 54.1667 6.7447 67.4464 40.8869




  GWAS USING LINEAR MIXED MODELS