Project measure / variable:   Donahue17   litter_size_birth

ID, description, units MPD:44302   litter_size_birth   mean number of pups born   [n]  
Data set, strains Donahue17   BXD   30 strains     sex: f     age: 3-57wks
Procedure colony observation
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  STRAIN COMPARISON PLOT
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Donahue17 - mean number of pups born



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested30 strains
Mean of the strain means4.97   n
Median of the strain means5.04   n
SD of the strain means± 0.948
Coefficient of variation (CV)0.191
Min–max range of strain means2.90   –   6.43   n
Mean sample size per strain7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 29 207.8997 7.169 5.3815 < 0.0001
Residuals 206 274.4245 1.3322


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD11/TyJ f 4.16 1.27   8 0.451 0.306 2.7, 6.3 -0.86
BXD12/TyJ f 4.88 0.922   8 0.326 0.189 3.5, 6.0 -0.1
BXD13/TyJ f 6.4 1.15   8 0.408 0.18 4.5, 7.8 1.51
BXD14/TyJ f 4.3 1.16   8 0.411 0.27 2.7, 5.8 -0.71
BXD15/TyJ f 4.83 1.12   8 0.398 0.233 2.8, 6.5 -0.15
BXD16/TyJ f 5.33 1.69   8 0.596 0.316 2.5, 8.0 0.38
BXD18/TyJ f 4.73 0.938   7 0.354 0.198 3.8, 6.3 -0.25
BXD19/TyJ f 5.94 1.31   8 0.464 0.221 4.2, 7.7 1.02
BXD1/TyJ f 3.54 0.396   8 0.14 0.112 2.9, 4.0 -1.51
BXD21/TyJ f 6.22 1.7   8 0.602 0.274 3.4, 9.0 1.32
BXD22/TyJ f 2.99 0.647   8 0.229 0.217 2.0, 4.0 -2.09
BXD24/TyJ-Cep290rd16/J f 4.53 1.1   7 0.417 0.243 3.3, 5.8 -0.46
BXD27/TyJ f 5.81 1.1   7 0.417 0.19 3.8, 7.0 0.88
BXD28/TyJ f 5.19 1.31   7 0.496 0.253 3.0, 6.6 0.23
BXD29-Tlr4lps-2J/J f 4.25 0.639   8 0.226 0.15 3.1, 5.4 -0.76
BXD29/Ty f 5.22 0.904   8 0.319 0.173 3.8, 6.4 0.26
BXD2/TyJ f 5.99 1.1   8 0.388 0.183 4.3, 7.4 1.07
BXD31/TyJ f 3.83 1.24   8 0.439 0.325 2.3, 6.0 -1.2
BXD32/TyJ f 5.42 1.17   8 0.413 0.216 3.1, 6.8 0.47
BXD33/TyJ f 2.9 0.515   8 0.182 0.178 2.4, 3.8 -2.18
BXD34/TyJ f 6.29 1.07   8 0.377 0.17 4.7, 8.0 1.39
BXD36/TyJ f 5.47 1.1   8 0.388 0.2 3.8, 7.0 0.53
BXD38/TyJ f 4.66 0.936   8 0.331 0.201 3.7, 6.7 -0.33
BXD39/TyJ f 5.62 0.835   8 0.295 0.148 4.2, 6.5 0.68
BXD40/TyJ f 4.8 0.382   8 0.135 0.0795 4.3, 5.3 -0.18
BXD42/TyJ f 5.45 0.87   8 0.308 0.16 4.3, 7.0 0.51
BXD5/TyJ f 4.16 0.776   8 0.274 0.187 3.0, 5.2 -0.86
BXD6/TyJ f 5.3 0.773   8 0.273 0.146 4.3, 6.8 0.35
BXD8/TyJ f 4.49 1.25   8 0.441 0.278 3.1, 6.7 -0.51
BXD9/TyJ f 6.43 2.69   8 0.952 0.419 2.0, 9.0 1.54


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD11/TyJ f 4.1625 0.4081 4.967 3.358
BXD12/TyJ f 4.875 0.4081 5.6795 4.0705
BXD13/TyJ f 6.4 0.4081 7.2045 5.5955
BXD14/TyJ f 4.3 0.4081 5.1045 3.4955
BXD15/TyJ f 4.825 0.4081 5.6295 4.0205
BXD16/TyJ f 5.325 0.4081 6.1295 4.5205
BXD18/TyJ f 4.7286 0.4362 5.5886 3.8685
BXD19/TyJ f 5.9375 0.4081 6.742 5.133
BXD1/TyJ f 3.5375 0.4081 4.342 2.733
BXD21/TyJ f 6.225 0.4081 7.0295 5.4205
BXD22/TyJ f 2.9875 0.4081 3.792 2.183
BXD24/TyJ-Cep290rd16/J f 4.5286 0.4362 5.3886 3.6685
BXD27/TyJ f 5.8143 0.4362 6.6744 4.9542
BXD28/TyJ f 5.1857 0.4362 6.0458 4.3256
BXD29-Tlr4lps-2J/J f 4.25 0.4081 5.0545 3.4455
BXD29/Ty f 5.225 0.4081 6.0295 4.4205
BXD2/TyJ f 5.9875 0.4081 6.792 5.183
BXD31/TyJ f 3.825 0.4081 4.6295 3.0205
BXD32/TyJ f 5.425 0.4081 6.2295 4.6205
BXD33/TyJ f 2.9 0.4081 3.7045 2.0955
BXD34/TyJ f 6.2875 0.4081 7.092 5.483
BXD36/TyJ f 5.475 0.4081 6.2795 4.6705
BXD38/TyJ f 4.6625 0.4081 5.467 3.858
BXD39/TyJ f 5.625 0.4081 6.4295 4.8205
BXD40/TyJ f 4.8 0.4081 5.6045 3.9955
BXD42/TyJ f 5.45 0.4081 6.2545 4.6455
BXD5/TyJ f 4.1625 0.4081 4.967 3.358
BXD6/TyJ f 5.3 0.4081 6.1045 4.4955
BXD8/TyJ f 4.4875 0.4081 5.292 3.683
BXD9/TyJ f 6.425 0.4081 7.2295 5.6205




  GWAS USING LINEAR MIXED MODELS