Project measure / variable:   Chesler3   kidney_vol

ID, description, units MPD:43595   kidney_vol   kidney volume   [cm3]  
Data set, strains Chesler3   CC pre w/par   77 strains     sex: both     age: 7-15wks
Procedure organ dimensions
Ontology mappings

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  STRAIN COMPARISON PLOT
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Chesler3 - kidney volume



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested64 strains69 strains
Mean of the strain means327   cm3 441   cm3
Median of the strain means312   cm3 400   cm3
SD of the strain means± 67.7 ± 99.9
Coefficient of variation (CV)0.207 0.227
Min–max range of strain means200   –   500   cm3 200   –   800   cm3
Mean sample size per strain1.1   mice 1.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 16875.0 16875.0 27.0 0.002
strain 2 31666.6667 15833.3333 25.3333 0.0012
sex:strain 2 5000.0 2500.0 4.0 0.0787
Residuals 6 3750.0 625.0


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
PreCCF0003/Ornl f 300.0 0.0   1   0.0 0.0 300.0, 300.0 -0.4
PreCCF0003/Ornl m 300.0 0.0   1   0.0 0.0 300.0, 300.0 -1.41
PreCCF0013/Ornl f 325.0 35.4   2   25.0 0.109 300.0, 350.0 -0.03
PreCCF0013/Ornl m 400.0 0.0   2   0.0 0.0 400.0, 400.0 -0.41
PreCCF0015/Ornl f 200.0 0.0   1   0.0 0.0 200.0, 200.0 -1.87
PreCCF0015/Ornl m 300.0 0.0   1   0.0 0.0 300.0, 300.0 -1.41
PreCCF0020/Ornl f 300.0 0.0   1   0.0 0.0 300.0, 300.0 -0.4
PreCCF0020/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF0044/Ornl f 300.0 0.0   1   0.0 0.0 300.0, 300.0 -0.4
PreCCF0044/Ornl m 500.0 0.0   1   0.0 0.0 500.0, 500.0 0.59
PreCCF0071/Ornl f 400.0 0.0   1   0.0 0.0 400.0, 400.0 1.08
PreCCF0091/Ornl f 350.0 0.0   1   0.0 0.0 350.0, 350.0 0.34
PreCCF0091/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF0094/Ornl f 300.0 0.0   1   0.0 0.0 300.0, 300.0 -0.4
PreCCF0094/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF0113/Ornl f 375.0 35.4   2   25.0 0.0943 350.0, 400.0 0.71
PreCCF0113/Ornl m 450.0 0.0   1   0.0 0.0 450.0, 450.0 0.09
PreCCF0138/Ornl f 400.0 0.0   2   0.0 0.0 400.0, 400.0 1.08
PreCCF0145/Ornl f 400.0 0.0   1   0.0 0.0 400.0, 400.0 1.08
PreCCF0145/Ornl m 650.0 0.0   1   0.0 0.0 650.0, 650.0 2.09
PreCCF0167/Ornl f 400.0 0.0   1   0.0 0.0 400.0, 400.0 1.08
PreCCF0170/Ornl f 300.0 0.0   1   0.0 0.0 300.0, 300.0 -0.4
PreCCF0170/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF0181/Ornl f 200.0 0.0   1   0.0 0.0 200.0, 200.0 -1.87
PreCCF0181/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF0189/Ornl f 250.0 0.0   1   0.0 0.0 250.0, 250.0 -1.14
PreCCF0237/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF0278/Ornl f 300.0 0.0   2   0.0 0.0 300.0, 300.0 -0.4
PreCCF0278/Ornl m 325.0 35.4   2   25.0 0.109 300.0, 350.0 -1.16
PreCCF0291/Ornl f 300.0 0.0   1   0.0 0.0 300.0, 300.0 -0.4
PreCCF0291/Ornl m 450.0 0.0   1   0.0 0.0 450.0, 450.0 0.09
PreCCF0305/Ornl f 375.0 35.4   2   25.0 0.0943 350.0, 400.0 0.71
PreCCF0305/Ornl m 500.0 0.0   2   0.0 0.0 500.0, 500.0 0.59
PreCCF0334/Ornl f 400.0 0.0   1   0.0 0.0 400.0, 400.0 1.08
PreCCF0334/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF0363/Ornl f 300.0 0.0   1   0.0 0.0 300.0, 300.0 -0.4
PreCCF0363/Ornl m 450.0 0.0   1   0.0 0.0 450.0, 450.0 0.09
PreCCF0380/Ornl f 300.0 0.0   1   0.0 0.0 300.0, 300.0 -0.4
PreCCF0380/Ornl m 700.0 0.0   1   0.0 0.0 700.0, 700.0 2.59
PreCCF0381/Ornl f 350.0 0.0   1   0.0 0.0 350.0, 350.0 0.34
PreCCF0388/Ornl f 350.0 70.7   2   50.0 0.202 300.0, 400.0 0.34
PreCCF0388/Ornl m 800.0 0.0   1   0.0 0.0 800.0, 800.0 3.59
PreCCF0453/Ornl f 300.0 0.0   1   0.0 0.0 300.0, 300.0 -0.4
PreCCF0453/Ornl m 500.0 0.0   1   0.0 0.0 500.0, 500.0 0.59
PreCCF0457/Ornl f 400.0 0.0   1   0.0 0.0 400.0, 400.0 1.08
PreCCF0457/Ornl m 350.0 0.0   2   0.0 0.0 350.0, 350.0 -0.91
PreCCF0462/Ornl f 250.0 0.0   1   0.0 0.0 250.0, 250.0 -1.14
PreCCF0462/Ornl m 600.0 0.0   1   0.0 0.0 600.0, 600.0 1.59
PreCCF0489/Ornl f 400.0 0.0   1   0.0 0.0 400.0, 400.0 1.08
PreCCF0489/Ornl m 500.0 0.0   1   0.0 0.0 500.0, 500.0 0.59
PreCCF0491/Ornl f 350.0 0.0   1   0.0 0.0 350.0, 350.0 0.34
PreCCF0491/Ornl m 350.0 0.0   1   0.0 0.0 350.0, 350.0 -0.91
PreCCF0508/Ornl f 325.0 35.4   2   25.0 0.109 300.0, 350.0 -0.03
PreCCF0508/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF0509/Ornl f 250.0 0.0   1   0.0 0.0 250.0, 250.0 -1.14
PreCCF0509/Ornl m 350.0 0.0   1   0.0 0.0 350.0, 350.0 -0.91
PreCCF0615/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF0695/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF0712/Ornl f 300.0 0.0   1   0.0 0.0 300.0, 300.0 -0.4
PreCCF0712/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF0717/Ornl f 275.0 0.0   1   0.0 0.0 275.0, 275.0 -0.77
PreCCF0717/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF0718/Ornl f 300.0 0.0   1   0.0 0.0 300.0, 300.0 -0.4
PreCCF0718/Ornl m 450.0 0.0   1   0.0 0.0 450.0, 450.0 0.09
PreCCF0739/Ornl m 600.0 0.0   1   0.0 0.0 600.0, 600.0 1.59
PreCCF0754/Ornl f 400.0 0.0   1   0.0 0.0 400.0, 400.0 1.08
PreCCF0754/Ornl m 500.0 0.0   1   0.0 0.0 500.0, 500.0 0.59
PreCCF0792/Ornl m 500.0 0.0   1   0.0 0.0 500.0, 500.0 0.59
PreCCF0821/Ornl f 400.0 0.0   1   0.0 0.0 400.0, 400.0 1.08
PreCCF0821/Ornl m 500.0 0.0   1   0.0 0.0 500.0, 500.0 0.59
PreCCF0829/Ornl f 400.0 0.0   1   0.0 0.0 400.0, 400.0 1.08
PreCCF0829/Ornl m 425.0 35.4   2   25.0 0.0832 400.0, 450.0 -0.16
PreCCF0857/Ornl f 400.0 0.0   1   0.0 0.0 400.0, 400.0 1.08
PreCCF0857/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF0866/Ornl f 400.0 0.0   1   0.0 0.0 400.0, 400.0 1.08
PreCCF0866/Ornl m 500.0 0.0   1   0.0 0.0 500.0, 500.0 0.59
PreCCF0867/Ornl f 400.0 0.0   1   0.0 0.0 400.0, 400.0 1.08
PreCCF0867/Ornl m 525.0 35.4   2   25.0 0.0673 500.0, 550.0 0.84
PreCCF0923/Ornl f 400.0 0.0   1   0.0 0.0 400.0, 400.0 1.08
PreCCF0923/Ornl m 500.0 0.0   1   0.0 0.0 500.0, 500.0 0.59
PreCCF0940/Ornl f 300.0 0.0   1   0.0 0.0 300.0, 300.0 -0.4
PreCCF0940/Ornl m 500.0 283.0   2   200.0 0.566 300.0, 700.0 0.59
PreCCF1009/Ornl m 500.0 0.0   1   0.0 0.0 500.0, 500.0 0.59
PreCCF1057/Ornl f 400.0 141.0   2   100.0 0.354 300.0, 500.0 1.08
PreCCF1057/Ornl m 500.0 0.0   1   0.0 0.0 500.0, 500.0 0.59
PreCCF1119/Ornl f 500.0 0.0   1   0.0 0.0 500.0, 500.0 2.55
PreCCF1119/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF1125/Ornl f 400.0 0.0   1   0.0 0.0 400.0, 400.0 1.08
PreCCF1125/Ornl m 500.0 0.0   1   0.0 0.0 500.0, 500.0 0.59
PreCCF1134/Ornl f 250.0 0.0   1   0.0 0.0 250.0, 250.0 -1.14
PreCCF1134/Ornl m 450.0 0.0   1   0.0 0.0 450.0, 450.0 0.09
PreCCF1136/Ornl f 350.0 0.0   1   0.0 0.0 350.0, 350.0 0.34
PreCCF1136/Ornl m 350.0 0.0   1   0.0 0.0 350.0, 350.0 -0.91
PreCCF1141/Ornl f 250.0 0.0   1   0.0 0.0 250.0, 250.0 -1.14
PreCCF1141/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF1190/Ornl f 200.0 0.0   1   0.0 0.0 200.0, 200.0 -1.87
PreCCF1190/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF1200/Ornl f 200.0 0.0   1   0.0 0.0 200.0, 200.0 -1.87
PreCCF1234/Ornl f 250.0 0.0   1   0.0 0.0 250.0, 250.0 -1.14
PreCCF1234/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF1237/Ornl m 500.0 0.0   1   0.0 0.0 500.0, 500.0 0.59
PreCCF1264/Ornl m 450.0 0.0   1   0.0 0.0 450.0, 450.0 0.09
PreCCF1390/Ornl f 400.0 0.0   2   0.0 0.0 400.0, 400.0 1.08
PreCCF1390/Ornl m 500.0 0.0   1   0.0 0.0 500.0, 500.0 0.59
PreCCF1401/Ornl f 400.0 0.0   1   0.0 0.0 400.0, 400.0 1.08
PreCCF1401/Ornl m 500.0 0.0   1   0.0 0.0 500.0, 500.0 0.59
PreCCF1447/Ornl f 250.0 0.0   1   0.0 0.0 250.0, 250.0 -1.14
PreCCF1447/Ornl m 250.0 0.0   1   0.0 0.0 250.0, 250.0 -1.91
PreCCF1478/Ornl f 350.0 0.0   1   0.0 0.0 350.0, 350.0 0.34
PreCCF1485/Ornl f 350.0 0.0   1   0.0 0.0 350.0, 350.0 0.34
PreCCF1485/Ornl m 500.0 0.0   1   0.0 0.0 500.0, 500.0 0.59
PreCCF1515/Ornl m 300.0 0.0   1   0.0 0.0 300.0, 300.0 -1.41
PreCCF1519/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF1524/Ornl f 250.0 0.0   1   0.0 0.0 250.0, 250.0 -1.14
PreCCF1524/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF1533/Ornl m 700.0 0.0   1   0.0 0.0 700.0, 700.0 2.59
PreCCF1537/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF1605/Ornl f 200.0 0.0   1   0.0 0.0 200.0, 200.0 -1.87
PreCCF1605/Ornl m 200.0 0.0   1   0.0 0.0 200.0, 200.0 -2.41
PreCCF1626/Ornl f 400.0 0.0   2   0.0 0.0 400.0, 400.0 1.08
PreCCF1626/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF1667/Ornl f 250.0 0.0   1   0.0 0.0 250.0, 250.0 -1.14
PreCCF1667/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF2307/Ornl f 300.0 0.0   1   0.0 0.0 300.0, 300.0 -0.4
PreCCF2307/Ornl m 350.0 0.0   1   0.0 0.0 350.0, 350.0 -0.91
PreCCF2489/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF4075/Ornl f 300.0 0.0   1   0.0 0.0 300.0, 300.0 -0.4
PreCCF4078/Ornl f 350.0 0.0   1   0.0 0.0 350.0, 350.0 0.34
PreCCF4078/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41
PreCCF4114/Ornl f 300.0 0.0   1   0.0 0.0 300.0, 300.0 -0.4
PreCCF4114/Ornl m 400.0 0.0   2   0.0 0.0 400.0, 400.0 -0.41
PreCCF4409/Ornl f 300.0 0.0   1   0.0 0.0 300.0, 300.0 -0.4
PreCCF4409/Ornl m 400.0 0.0   1   0.0 0.0 400.0, 400.0 -0.41


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
PreCCF0013/Ornl f 325.0 17.6777 368.2557 281.7443
PreCCF0013/Ornl m 400.0 17.6777 443.2557 356.7443
PreCCF0278/Ornl f 300.0 17.6777 343.2557 256.7443
PreCCF0278/Ornl m 325.0 17.6777 368.2557 281.7443
PreCCF0305/Ornl f 375.0 17.6777 418.2557 331.7443
PreCCF0305/Ornl m 500.0 17.6777 543.2557 456.7443


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
PreCCF0013/Ornl both 362.5 12.5 393.0864 331.9136
PreCCF0278/Ornl both 312.5 12.5 343.0864 281.9136
PreCCF0305/Ornl both 437.5 12.5 468.0864 406.9136




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA